Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02525 ATGAAGGCATTGATTCTGGTTGGAGGGTATGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTCATTGATTTTGCTAACAAGCCTATGATTCTGCATCAGATAGAGGCTCTTAAGGACATTGGAGTTACTGCAGTGGTGCTGGCTGTCAATTACCGAGCAGGGGTAATGTTGAATTTTTTGAAAGATTTTGAGGAAAAGCTAGACATCAAAATCACTTGCTCTCAAGAAACTGAACCATTGGGGACTGCCGGTCCCTTGGATCTTGCCAGAGATAAGCTGATAGATGGCTCTGGTGAGCCTTTTTTCGTTCTCAACAGTGACGTTATCAGTGAGTATCCACTAAAAGAAATGATACCATTCCACAAATCCCATGGAGGAGAGGCTTCCATATTGGTGACAAAGGTTGATGAGCCATCGAAATATGGTGTAGGTGTGATGGAAGAGACCACTGGGAAGGTTGAGAAATTTGTAGAGAAACCAAAGTTGTTTGTTGGTAACAAAATCAATGCTGGGATCTACCTATTGAACCCCTCAGTTTTGGACCATATTGAACTGAGACCCACTTCTATCGAGAAAGAGGTGTTTACAAAGATTGCAGCAGCGAAAAAGCTATATGCAATGGTAGTGCCAGGATTCTGGATGGACATTGGACAACCAGGGGACTATATCACAGGCCTGAGACTCTACCTGAACACACTGAGGAAGAAGACTTCTTCCAAGTTGGCCAGTGGCCCTCAAATTTCGGGGAACGTGGTTGTGCATGAGACAGCCAAAATTGGTGAAGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCCGGCTGTATAATTGAGTCAGGTGTAAGGCTTTCAAGCTGCACTGTGATGCGAGGAGTTTGGATTAAGAAGCATGCTTGCATATCCAACAACATCATTGGATGGCATTCGACTGTTGGGCAATGGGCTCGTGTACTGTTGAGAAAATGA 978 0.4468 MKALILVGGYGTRLRPLTLSVPKPLIDFANKPMILHQIEALKDIGVTAVVLAVNYRAGVMLNFLKDFEEKLDIKITCSQETEPLGTAGPLDLARDKLIDGSGEPFFVLNSDVISEYPLKEMIPFHKSHGGEASILVTKVDEPSKYGVGVMEETTGKVEKFVEKPKLFVGNKINAGIYLLNPSVLDHIELRPTSIEKEVFTKIAAAKKLYAMVVPGFWMDIGQPGDYITGLRLYLNTLRKKTSSKLASGPQISGNVVVHETAKIGEGCLIGPDVAIGPGCIIESGVRLSSCTVMRGVWIKKHACISNNIIGWHSTVGQWARVLLRK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02525 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 232 IPR029044 -
Trre8g02525 325 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 321 - -
Trre8g02525 325 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058
Trre8g02525 325 Gene3D Hexapeptide repeat proteins 233 322 - -
Trre8g02525 325 FunFam mannose-1-phosphate guanyltransferase beta 1 232 - -
Trre8g02525 325 Pfam Bacterial transferase hexapeptide (six repeats) 255 287 IPR001451 -
Trre8g02525 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Trre8g02525 325 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02525 Trre-Chr8 20793226 20795106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02525 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 21.244 2.95e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02525 K00966 - aew:130793371 566.229