Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02510 ATGGAACCTCAGGTTGCAGTTCCTCGCAGAAAACATAACCAACAACAGAGCAACGTAAGTAACTCATTAAGGTTCTGCTTTTCCATTCTTCTAATCCAAGAGGCAAGCTTTGGAATTTTCTTGGGGTTTCATCTTCATTACTCTTCAATTTCAAAACCCACTAAGGGATTAGATGTTTGTTTTCTCCTTAACCATGGTTTTGCTATGTTGCAAGAAGGGTCATCTTCTGCTTCTTCACCCTTAAAGTTTTTCTCCATGATGCCAGTTTCACCTAGCTTAGGATTTCCACATTCTTGGCTTAAAGAACTGAAATCTGAAGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCGCTTGTGCTAAGCAGGTAGCTGATTGTAATCTTGAGAATGCAAATGCAACACTTGAGCAAATTTCCATGCTTGCTTCCCCTACCGGCGACACCATGCAGCGAATCGCAGCCTATTTTACGGAAGCACTTGCTGATAGGATAATCAAAGCATGGCCTGGTCTCCACAAAGCAGTTAACTCTACTAGAATGGTTATGGCTTCAGAAGAGATTCTTGTGCAGAAGCTCTTTTGTGAGCTTTTCCCTTTCTTGAAGGTATCTTATATTCTTACAAATCAAGCTATCATCGAAGCGATGGAAAGGGAGAAAATGGTTCACATAATTGATCTCAATGCTGCTGAACCTTCTCCATGGATTGCACTCTTACAAGTTTTGAGCACGCGTCCCGAAGGCCCTCCGCATTTGAGAATCACCAGCGTTCATCCGAAGAAAGAAGTTCTCGACCGGATTGCTCATAGACTGATTGAAGAAGCTGAAAAGTTGGATATACCATTCCAATTCAATCCCATTGTCAGCAAATTAGAAGACCTTGAGTTTGAGAAACTTCGTGTTAAAACCGGCGAGGCATTAGCAATTAGTTCTGTCCTCCAATTACATACCCTTTTAACCTTGGATGATGCAAAGAGAAAATCTCCTCTTTTGTCACAACCCTCAAATGAAATTCACTTGCAAAGTTCCCATCCAATGAACCAAACTACATTAGGTGATTTGGTCGAGAAAGATACGGTTAACGGATATGCCAGAAGTCTTGAATCAATCTCATCACCACCGGCTTCAATTAACATGGAGAGATTTCTCAATGCCTTGTGGAGTTTATCACCAAAGATAATGGTTGTGACCGAACAAGACTCGAACCATAATGGTTCAACTCTTATGGAAAGGCTTCTAGAAGCTTTATACTCGTATGCAGCATTATTTGATTGTTTGGAATTAACAGTCCCAAGAAACTCATTGGAGAGATTTAAGGTCGAGAAGATGCTTTTCGGCGAGGAAATCAAGAACATTATTGCATGTGAAGGATTAGAAAGAAAGGAAAGACATGAAAAGCTTGATAAGTGGTTTATGAGATTTGATTGTAGTGGATTTGGTCATGTGCCTTTAAGTTATTTTGGTAGGTTACAAGCAAGGAGGTTTCTGCAGAATTATGGTTGTGCAGGATATAAAATGAAGGAAGAAAATGGTTGTGTTGTAATATATTGGCAAGATAGGTCCTTGTTTTCAATATCAGCTTGGAAATCTATGAAGTAA 1596 0.3991 MEPQVAVPRRKHNQQQSNVSNSLRFCFSILLIQEASFGIFLGFHLHYSSISKPTKGLDVCFLLNHGFAMLQEGSSSASSPLKFFSMMPVSPSLGFPHSWLKELKSEERGLYLIHLLLACAKQVADCNLENANATLEQISMLASPTGDTMQRIAAYFTEALADRIIKAWPGLHKAVNSTRMVMASEEILVQKLFCELFPFLKVSYILTNQAIIEAMEREKMVHIIDLNAAEPSPWIALLQVLSTRPEGPPHLRITSVHPKKEVLDRIAHRLIEEAEKLDIPFQFNPIVSKLEDLEFEKLRVKTGEALAISSVLQLHTLLTLDDAKRKSPLLSQPSNEIHLQSSHPMNQTTLGDLVEKDTVNGYARSLESISSPPASINMERFLNALWSLSPKIMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLELTVPRNSLERFKVEKMLFGEEIKNIIACEGLERKERHEKLDKWFMRFDCSGFGHVPLSYFGRLQARRFLQNYGCAGYKMKEENGCVVIYWQDRSLFSISAWKSMK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02510 531 ProSiteProfiles GRAS family profile. 103 528 IPR005202 -
Trre8g02510 531 Pfam GRAS domain family 112 528 IPR005202 -
Trre8g02510 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 523 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02510 Trre-Chr8 20590794 20596444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02510 68 531 GRAS Transcription Factor Family AT1G50420 64.033 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre8g02510 GRAS 1e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02510 - - gmx:100814131 700.279