Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02461 ATGGAAGAAACAAAATGGATGATACCCACTTCACTTTTCCTCCTCACGTTTCTCATCCTTTTAAAATTCACACTAAAGAAACAAGCCAAGCACAAAAACCTCCCTCCATCCCCACCTTCTTTACCATTTATAGGCCATCTTCATCTCATAAAACAACCTTTACATCGTAGTCTCAACCGGCTTACAAAAATCTACGGCCACATGTTCTTCCTCCACGTGGGCACACGCAACATCCTTGTCGTCTCTTCACCTTCCGCGGTAGAAGAATGTTTGTCAAATAATGACATTACATTCGCAAATCGTACATCTCTAACACTTGCTGGAAAATATCTCAATTACAACAATACGACGTTAGGTTTTTCTTCCTACGGTGAACTTTGGCGCAAACTACGTCGTTTAACAACAACAGAGCTTTTCTCCACCAATCGTCTTGCCATGTTAACCAAAGTTCGAGAGGAAGAAGTAAAATTGTTAGTTAAGCAAATATTCGAAGGGTGCAAAGGACAATTAATGTCAAAGGTTGATCTCAAAACAAAAACTTTAGAACTTTCTTTCAACATCATGTTGAGAGCGATATCGGGGAAACAATACTATGGTGAGGACGCGGTTGCGTTAGAAGGAAAGGAGTTTCAAATTTTAATGAATGAATATATAGAGCTTCTTGGAAGTGGGAATTTGAATGATTTTTTTCCTATACTAAAATGGATTGATTTTCAAGGGAAGAAAAAGAAGATGGTGAAGTTGATGAAAAAAATGGATTGCTTCCTTCAAAAGCTACTTGATGAGAAACGAAGAAATTGGAGTAATGATCAAAGAAATATGACGTTGATTGATGTTATGTTGGACTTGCAACAAAAGGAGCCAGAATTCTATACACATGAAATAGTGAAAGGTGTTATTCTGGTAATGCTTGTAGCTGGCTCTGAAACTTCAGCTACAACAATGGAATGGGCACTCTCACTTCTCCTAAACCATCCAGAAAAAATGAATAAGGTAAAGGTTGAGATAGACACTTATTTGAGACAAGATCAACTTATGAATGAATCAGATTCTTTGAAACTAAACTACTTGCAAAAAGTAATTATGGAGACACTTCGTTTATACCCTGTGGCTCCACTATTAATACCACATGAATCTTCCAATGATTGTAATGTTTGTGGATATAATATACCAAAAGGGACAATGCTTCTTGTGAATCTATGGACACTACATAGAGACCCCAACATATGGATAAATCCAACATGGTTTGTGCCAGAGAGATTTGAAGATGGAGAATTAAGTAATGATGAAATTTACAATATGCTTCCATTTGGTATTGGAAGAAGATCTTGTCCTGGTTCTGTTTTAGCAAAACGTTTTATGGGACATGCATTAGGATCTTTGATTCAATCTTTTGAATGGGAAAGAATAGGAGATGAAAAAATTGATATGAGTGATGGAATAGGGCTTACAATGCCTAAAGTTGAACCTTTGGTTGCATTATGCAAGCCACGCCAAGTTATGATCAAGGCTTTGTCCAATATGTAA 1527 0.3687 MEETKWMIPTSLFLLTFLILLKFTLKKQAKHKNLPPSPPSLPFIGHLHLIKQPLHRSLNRLTKIYGHMFFLHVGTRNILVVSSPSAVEECLSNNDITFANRTSLTLAGKYLNYNNTTLGFSSYGELWRKLRRLTTTELFSTNRLAMLTKVREEEVKLLVKQIFEGCKGQLMSKVDLKTKTLELSFNIMLRAISGKQYYGEDAVALEGKEFQILMNEYIELLGSGNLNDFFPILKWIDFQGKKKKMVKLMKKMDCFLQKLLDEKRRNWSNDQRNMTLIDVMLDLQQKEPEFYTHEIVKGVILVMLVAGSETSATTMEWALSLLLNHPEKMNKVKVEIDTYLRQDQLMNESDSLKLNYLQKVIMETLRLYPVAPLLIPHESSNDCNVCGYNIPKGTMLLVNLWTLHRDPNIWINPTWFVPERFEDGELSNDEIYNMLPFGIGRRSCPGSVLAKRFMGHALGSLIQSFEWERIGDEKIDMSDGIGLTMPKVEPLVALCKPRQVMIKALSNM 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02461 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Trre8g02461 508 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PANTHER CYTOCHROME P450 82C3-RELATED 12 498 - -
Trre8g02461 508 CDD CYP81 66 491 - -
Trre8g02461 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 FunFam Cytochrome P450 family protein 25 501 - -
Trre8g02461 508 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02461 508 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02461 Trre-Chr8 20000377 20007031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02461 10 505 Cytochrome P450 AT4G37320 44.466 3.28e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02461 - - gmx:100794610 714.531