Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02440 ATGAGTGTGTGTGTGTCTCTATTCTTTTGTTGCCTCTCTTCTCTCCACTCCAATTCACACACTTCAACGGTTCAAATTTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCATACTTCCAAACCAAATCTACTTCCTCAACTCTCTCACTCACTTCAATCACACTACCATATCTTATACTCAGCTGCTGGGAATGGCTTATATGTGTGCAGACAGTGGAAATCTAATGGCAATTGCTCAACAAGTCATCAATCAAAAACAACAGCAACAAGAACAACAAGAACAGCAACATCATCATCATCATCATCTCTTAGGTTTAACCAACCCTCTCTCTCTTCATCCATGGAACAACAACAACAATAATAATACTCCAGTTTCATCACTACCACCTTTATCTTTCCCACCTACAGATTTCACCGACCCATTTCAAGTCGGATCGGGTCAAGAAACTCCCGATCCCACTTTCCATTTCCCTCCCCCACTCGACCCTCACTCCACCACCTTCCGTTTCTCCGATTTCGATTCCGATGACTGGATGGACACTTTAATGGCAGCCGCTGACACACAAACCCAAGATTTTCATCTCAGTCCGTTTTCCTCCAATCCGACCCGACTCTCTCCACAATCGGATCTTCTCTTACCCGTCGCCACCGTTCCAATCCAAATCCCAACACAACAACAACCACCCACTCCCCAACGCAAAAACCACACCACCACAACCGAAACGACGTCGTCTACTACTACTACTACTACTACAAACCCTATTCTAAAATCCTTAATCGAAATCGCTTCTCTAATTGAAACCGAACCAAATCAAGCCATTGAAACCCTAACTCATCTCAACAAATCAATTTCACAAAACGGAAACCCTAATCAAAGAGTTTCATTCTACTTCTCACAAGCTTTAACCAACAAAATCACTTCACAATCACAAATTTCTTCACCAACAACTACATGGGAAGAATTAACACTCTCTTACAAAGCCCTAAACGATGCATGTCCTTATTCAAAATTCGCACATTTAACCGCAAATCAAGCAATTCTCGAAGCAACAGAAGGAGCAACCAATATTCACATCGTTGATTTTGGAATTGTTCAGGGGATTCAATGGGCTGCATTATTACAAGCATTTGCAACTCGTTCTTCTGGTAAACCTAATAGTGTAAGAATTTCTGGTATACCTGCTATGGCTTTAGGAACTTCACATGTTTCTTCAATTTCAGCTACCGGTAATCGTTTATCTGAATTTGCGAAACTTTTAGGGTTAAATTTTGAGTTTACGCCGATTCTTACACCGATTCAGTTGCTTGATGAGTCTAGCTTTTGTATTCAACCTAATGAGGCTTTAGCTGTTAATTTCATGCTTCAATTGTATAATCTTTTGGATGAGACTATGGATGCTGTTGAAACCGCGCTTCGTTTGGCTAAATCCTTGAATCCTAAAATTGTTACTCTTGGTGAATATGAAGCTAGTTTGACGACTCGGGTTGGTTTTGTTGATCGGTTTAAGACTGCTTTTAATTATTTTGCTGCTTTTTTTGAGAGTTTGGAGCCGAACATGGCATTGGATTCGCCTGAGAGGTTTCAGGTGGAGAGTCTTTTACTTGGTAGGAGAATTGATGGTGTTATTGGTGTGAGGGAGAGGATGGAGGATAAAGAACAGTGGAAGATTTTGATGGAAAAATGCGGTTTTGAATCGGTTAGTTTGAGTCATTATGCAATTAGTCAAGCTAAGATATTGCTGTGGAATTATAGTTATAGTTCTTTGTATTCTCTTGTTGAATCTCAACCTGGGTTTTTGTCTTTGGCTTGGAAAGATGTTCCTCTATTGACTGTTTCTTCTTGGCGTTGA 1860 0.4054 MSVCVSLFFCCLSSLHSNSHTSTVQISISLSLSLSLSLSFILPNQIYFLNSLTHFNHTTISYTQLLGMAYMCADSGNLMAIAQQVINQKQQQQEQQEQQHHHHHHLLGLTNPLSLHPWNNNNNNNTPVSSLPPLSFPPTDFTDPFQVGSGQETPDPTFHFPPPLDPHSTTFRFSDFDSDDWMDTLMAAADTQTQDFHLSPFSSNPTRLSPQSDLLLPVATVPIQIPTQQQPPTPQRKNHTTTTETTSSTTTTTTTNPILKSLIEIASLIETEPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITSQSQISSPTTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGATNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSHVSSISATGNRLSEFAKLLGLNFEFTPILTPIQLLDESSFCIQPNEALAVNFMLQLYNLLDETMDAVETALRLAKSLNPKIVTLGEYEASLTTRVGFVDRFKTAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRERMEDKEQWKILMEKCGFESVSLSHYAISQAKILLWNYSYSSLYSLVESQPGFLSLAWKDVPLLTVSSWR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02440 619 Coils Coil 79 99 - -
Trre8g02440 619 MobiDBLite consensus disorder prediction 225 253 - -
Trre8g02440 619 MobiDBLite consensus disorder prediction 114 130 - -
Trre8g02440 619 MobiDBLite consensus disorder prediction 114 158 - -
Trre8g02440 619 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 257 614 IPR005202 -
Trre8g02440 619 ProSiteProfiles GRAS family profile. 249 619 IPR005202 -
Trre8g02440 619 Pfam GRAS domain family 260 619 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02440 Trre-Chr8 19786561 19788543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02440 68 619 GRAS Transcription Factor Family AT5G66770 53.691 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre8g02440 GRAS 4.1e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02440 - - adu:107477343 638.262