Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02420 ATGAACACAAAGGGTTTGGTAGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTACTGAATGATCAAGCATTTGCAATATGTGTTTTGATGGCATTATTCACCACTTTCATCACCACACCAATAGTGATGGCAGTGTATAAACCGGCTCGGAGAGGATCGCCGTACATGCATAAAACAATATTGCGCAAAGATCCAGACACAGAACTTCGAATACTAGCTTGTTTCCACAGCACCTACAACATTCCTACATTAATCAATCTAATAGAATCATCAAGAGGAACACGGAAGCGAGGAAAGTTATGCATATATGCAATGCATTTGATGGAACTCTCGGAAAGGCCTTCAGCTATATCAATGGTTCATAAGGCAAGAAATAATGGTATGCCCTTTTGGAACAAAAAACAACACGCCAACAACGATCAAATGGTAATTGCATTTCAAGCTTATGGACATTTAAGCAGTGTCAATGTTCGTCCGATGACAGCAATTTCATCTCTCAATAACATCCATGAAGACATTTGTTCAAGTGCTCACCAAAAGCGAGTCGCAATGATTCTACTTCCATTCCACCAACACCAGCGTGTTGATGGAAATATGGAGTCACTAGGCCATTCATTCCGCGTAATGAATGGTCTTGTACTTAGTCATGCTCCTTGCTCAGTCGGAATTTTGATCGACCGTGGCCTTGGAGGGACTACTCAAGTCCATGCTAGTGATGTGTCTTACAATGTTGTCGTAGCCTTTTTTGGAGGATGCGATGATCGTGAAGCCCTAGCATACGGTATGAGAATGGCAGAACATCCTGGAATTAGACTCACAGTTATAAAATTTATTACTCCGCCGGGGATAACATTGGCATTTGGTGCTAAATTGATTGGTATAACAGCTAACAAAGATAGAAAAGTAATAAAAATTGCTAGTGGCACCTCCCCTGATGAAGATAAACAAGAGGATGACCAATTTTGGTCAGAGTTTTTAGGTGTTTGTTGTAAGAGTGAAGAGTCTATAGTTTATGAAGAAAGATTGGTAGAAAGTAGAGATGATGTTGTGACTGTATTAAGGGAAAGGAATAGAAGCAATCTGATTTTAGCAGGTAGAATGCCACCAGTGGTACCTTTGCTACATGGAAGTGATTGTGCTGAGCTTGGTCCTGTTGGAAGCTATTTAGCTTCTTCTGAGTTTTCTACATTTGCATCAGTTATAGTATTTCAACAATATGATCCTAAAACAGATATTCATCCATTGGTGATGGAGGTTTCGGATTACTCTGACATGCCAGACACACCGATACACGGCTTATAG 1308 0.4052 MNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGSPYMHKTILRKDPDTELRILACFHSTYNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERPSAISMVHKARNNGMPFWNKKQHANNDQMVIAFQAYGHLSSVNVRPMTAISSLNNIHEDICSSAHQKRVAMILLPFHQHQRVDGNMESLGHSFRVMNGLVLSHAPCSVGILIDRGLGGTTQVHASDVSYNVVVAFFGGCDDREALAYGMRMAEHPGIRLTVIKFITPPGITLAFGAKLIGITANKDRKVIKIASGTSPDEDKQEDDQFWSEFLGVCCKSEESIVYEERLVESRDDVVTVLRERNRSNLILAGRMPPVVPLLHGSDCAELGPVGSYLASSEFSTFASVIVFQQYDPKTDIHPLVMEVSDYSDMPDTPIHGL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02420 435 PANTHER CATION/H + ANTIPORTER 1 409 - -
Trre8g02420 435 Gene3D - 1 55 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02420 Trre-Chr8 19607307 19608968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02420 1 424 Antiporter Super Family AT3G17630 64.858 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02420 K26731 - gmx:100818975 731.095