Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02408 ATGGGAGGTGGAGGAGGTATCATGAATGAAGAAGAAAACAAATGGCCACCATGGTTACAACCACTTCTTCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCACATAAGAGTGAATGTAATATGTTTTGTTTGGATTGTGTTAATGGTGCTCTTTGTTCTGCTTGTCTTGTTTCTCACAAACAACATAGAACAATTCAGATAAGAAGGTCTTCATACCATGATGTGATAAGGGTTTCTGAGATACAAAAATTTCTAGACATATCAGAAGTTCAAACCTATGTTATAAACAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGGGTCACCAATACCTGCCAAGTTTGTGACCGTAGTCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAATTGATGAGGAAGAATAAAATGTTAAGTCAGAAAGATGGATCTGATGGTGAAGAGTCAATGAATGGCATTAGCAATGGAAGAAACAAAATTCATAGCTTTACACCTTCAACACCACCTCCAACAGTTGTGAATTACAGAACAGTGAAGAGAAGGAAAGGAGTTCCACATAGAGCTCCAATGGGAGGAGGAATCATTATAGAATACTGA 651 0.3856 MGGGGGIMNEEENKWPPWLQPLLQTSFFVQCKVHSDSHKSECNMFCLDCVNGALCSACLVSHKQHRTIQIRRSSYHDVIRVSEIQKFLDISEVQTYVINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFNFCSLGCKIVGTSKKLMRKNKMLSQKDGSDGEESMNGISNGRNKIHSFTPSTPPPTVVNYRTVKRRKGVPHRAPMGGGIIIEY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02408 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 208 - -
Trre8g02408 216 Pfam PLATZ transcription factor 71 142 IPR006734 -
Trre8g02408 216 MobiDBLite consensus disorder prediction 162 191 - -
Trre8g02408 216 CDD Bbox2 31 70 - -
Trre8g02408 216 MobiDBLite consensus disorder prediction 154 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02408 Trre-Chr8 19449214 19450819 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre8g02408 PLATZ 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02408 - - gmx:100810757 373.629