Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02384 ATGGAGAATGAGGATTCCGTTGACGTTGTTTCCAATGATGTTACTTATAGTGATACGGCTGAAGCTGAGTTAAGTGATCACGAGGATGACAGTGAGGCGAAATCTAGTGGATGCGAAAGTTCGGATGATAGTTACGACAGTGAGGATGGTGATGACAGTGATGATGATGATGATGATGATGCTGATGATTCTGCTGGAGTAAATGCAGAAGTAAATGCAGGTGATAGAATGGTACCTATAAATTCGATTACTGCCGATGAAATTGTTGCGTTGGAATTTTCTACTGTTGAGGAAGCATATGACTTTTATTATCGTTATGGCAAATGTAAAGGATTTTCCATTAGAAAACATGATCGTAGGTATGGAGGGCCTAAAAGTAATAGAAAACTATTAATGAGGCAATTTGTATGTAGTAAACAAGGATTAAGAGAGAAGAAACACTTGTGTAGGTTAGATAGGAAAAGGGAACATAGACGATTGACCCGTACTGATTGCAAAGCTAGACTTCGTGTGAAGTATAAAGCCAAGAAGGGTACATATGTAGTGTCAATTTTTGTAGAGGGTCATAACCATGAATTAACCCCATCTAAGTATGTGCACCTGCACCCAGTTTTTCGTAAAATTTCAGAATCGGATAAAGCTCAAATTGACGGTCTTCAGTCTCATGGTGAATCAAATATGATAGAGCAAGCTCGTTTTGGTGCATATTGTGCTGCTTTTACTAGTTTTTGTAAAGAAGCTTCAAAAAAGGATGGTGTATATGGGCAAATAATGGAGGACATCTTGAATTTGCAAAAAAAACTCAAACGAAATGTCGAGTCTGATGCTGTGTCGGTTGGTGATTCTTTAAGCCAAAGTGTGAAAGTTACCAAGAAAGGTAAAAGAAAACAAATCTGTGATGGTGAAACAAGTGTGCAAAATAAATTTTCGGTTCTGCCGCAAAATCGTGGTGCTACCACAACGTCAAATATCCCTCGAGTGAATGTTTCTCAACCTTTGATGCACGTGATGCCTGTGATGCCTTTCATGCCTGTGATGCAATCTGTAGGTACATCGTCGCAAGTACAACCCATGCACCCAATCTATGGAATGCCCTTTGTTCAAAGTTCAAATTCGTGCTTCGGTCTGTTACAACAAGTGATGAACAATGCTGGAAATGAATGA 1164 0.3918 MENEDSVDVVSNDVTYSDTAEAELSDHEDDSEAKSSGCESSDDSYDSEDGDDSDDDDDDDADDSAGVNAEVNAGDRMVPINSITADEIVALEFSTVEEAYDFYYRYGKCKGFSIRKHDRRYGGPKSNRKLLMRQFVCSKQGLREKKHLCRLDRKREHRRLTRTDCKARLRVKYKAKKGTYVVSIFVEGHNHELTPSKYVHLHPVFRKISESDKAQIDGLQSHGESNMIEQARFGAYCAAFTSFCKEASKKDGVYGQIMEDILNLQKKLKRNVESDAVSVGDSLSQSVKVTKKGKRKQICDGETSVQNKFSVLPQNRGATTTSNIPRVNVSQPLMHVMPVMPFMPVMQSVGTSSQVQPMHPIYGMPFVQSSNSCFGLLQQVMNNAGNE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02384 387 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 231 - -
Trre8g02384 387 MobiDBLite consensus disorder prediction 42 65 - -
Trre8g02384 387 Pfam FAR1 DNA-binding domain 101 194 IPR004330 -
Trre8g02384 387 MobiDBLite consensus disorder prediction 1 73 - -
Trre8g02384 387 MobiDBLite consensus disorder prediction 27 41 - -
Trre8g02384 387 Coils Coil 385 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02384 Trre-Chr8 19242476 19245285 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g02384 FAR1 1.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02384 - - mtr:120578128 222.631