Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02381 ATGGCTTCTTCTATGTTTCTCAGTCTTATGTTTTTGTTGCCTCTGGTGTTGCTTGAAGCAAAGGAGTTTGATGTTGGTGGCAAAGAAGGTTGGATCGTGAAACCTTCTGATTACTATAGCCATTGGGCTCAAGCTAATAGGTTTCAAATCAATGACACTCTCCATTTCAAGTACAATAAAGAGAATGATTCAGTTCTTGTGGTGAAAAAGGAGGACTATGATTCTTGCAACACAAACAATCCAAAACAAAAATTGGACGATGGGGATTCAAAAATTAAGCTCAGTGATTCTGGTCTCTATTATTTCATCAGTGGCAATGTTGAAAATTGCAAGCATGGTGAAAAGGTTATTGTTTTAGTCATGGGTAGACACCAACACCACCCTCTTCCCACCACAACACCTGCACCATCTCAGCCGCCGGCAAGTGCCTTGTCGCCTCCTCAGATTCACTCATCCGCTTTGGATACTCCAGCGCCGTCTCCATCTAAAGCAAGTTCTGTTGGTGTGAGTATGGGATTTGGGTTTTTTTGGTGTTTAGTAGCTATGCAGGGTTTGTTTATTAGTTTGTGTTATTGTTGTGAGACTTTGTAG 591 0.4146 MASSMFLSLMFLLPLVLLEAKEFDVGGKEGWIVKPSDYYSHWAQANRFQINDTLHFKYNKENDSVLVVKKEDYDSCNTNNPKQKLDDGDSKIKLSDSGLYYFISGNVENCKHGEKVIVLVMGRHQHHPLPTTTPAPSQPPASALSPPQIHSSALDTPAPSPSKASSVGVSMGFGFFWCLVAMQGLFISLCYCCETL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02381 196 SUPERFAMILY Cupredoxins 20 121 IPR008972 -
Trre8g02381 196 CDD OsENODL1_like 21 121 IPR041846 -
Trre8g02381 196 Gene3D - 19 125 IPR008972 -
Trre8g02381 196 Pfam Plastocyanin-like domain 31 113 IPR003245 GO:0009055
Trre8g02381 196 FunFam Early nodulin-like protein 1 20 125 - -
Trre8g02381 196 PANTHER BLUE COPPER PROTEIN 21 141 IPR039391 GO:0009055
Trre8g02381 196 MobiDBLite consensus disorder prediction 128 161 - -
Trre8g02381 196 MobiDBLite consensus disorder prediction 144 161 - -
Trre8g02381 196 ProSiteProfiles Phytocyanin domain profile. 21 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02381 Trre-Chr8 19214756 19215516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02381 5 186 Phytocyanin Superfamily AT4G28365 42.857 1.83e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02381 - - gmx:100803858 196.823