Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02350 ATGTCAACTTCAAAAACTTTCTACCCTCTCCAAATTAGATATGTTTTTCAACTCTTTGACAGGTATCTGCAAAACAACAAGTGTATAAAGTTAAATCAGCTAACAATAAATTCTGGAGGGGTTGCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTGTAAAAGAAGCAGTAGCTGTCATAAAGTTATCTTCATCGAGAATGGCAACACAGTCCGAATGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAATTCAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAGCAAGTTTTGAGCGTGATGCAATTGGTGAAACAACATGTTCAGAGCTTTTGAAAGCACTTGAGCTTAGTCGGTGTCTCTTGTTTATGAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGTTATCAATCTTGGGAGATAAAATGAACATGTTTAGTGGGATGATAGAAGGGTTGATTTGGTCTCCACAAAGCAACAACGAATTTGATAAGCAAGTTCCACTGATGGATGAGATTGATACAAAGAAATAG 606 0.3977 MSTSKTFYPLQIRYVFQLFDRYLQNNKCIKLNQLTINSGGVASFALFNVHGSDDASVKEAVAVIKLSSSRMATQSECLGYEFAKWLGVQTPQARVIHNTNSEWLQIKEAAEKARDAASFERDAIGETTCSELLKALELSRCLLFMRMDEMMRGQRGWRELSILGDKMNMFSGMIEGLIWSPQSNNEFDKQVPLMDEIDTKK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02350 201 Pfam Actin-fragmin kinase, catalytic 29 165 IPR015275 -
Trre8g02350 201 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 31 146 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trre8g02350 201 SUPERFAMILY Protein kinase-like (PK-like) 32 147 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02350 Trre-Chr8 18895126 18897243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02350 33 145 Protein tyrosine phosphatase (PTP) family AT5G23720 69.912 3.78e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02350 K14165 - jre:109000311 178.718