Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02340 ATGGTTGGGGGTGGAAATGGAGAGTGGCCTGATGGTGGGGGGTTTAGTCCTGGTCCCATGACTCTGCTTTCCAGCTTGTTTGGGGACAACGATGACTGTAAGACGTTCTCAGAGCTCCTCGCTGGCGCCATGTCGGATGTGGAGCATGGAAGAGGAAGAGGTGGTGATGGTGGTGGTTTGTCAACAGCTCCACCTCAGCAAGCACAAGCACAAGGCTACTCCAATGTTCAAATCCAATCCGAACATATTACTGCCTCATTGACACAAGTTCCTACAGTTACATTCAATTACATTCCACAACAGTTGATACCAAACTCGGAGGAATCGAAGACAAAATCAATCGATTATTCTTCTAACTCGGAACAAAGATTGCAGCAGTCTTCTTTTGTAAATTTTGAGAAGGCTAATGACGACGGCTACAACTGGAGGAAATATGGACAAAAACAAGTGAAAGGTTGTGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCCAACTGTCCCGTGAAAAAAAAAGTCGAACGCGATCTTGTTGATGGTCATGTTACTCAAATTATTTATAAAGGAGAGCACATTCATCAACAACCTCATCCTAGCAAGCTCACAAAAGAGAACTCAAATGTGCAACAAGAGTTGTTAGAAACATGTGACAGTGATGAAGAAGGAGATAATGAAACTGAAGTAGATTATGAACCTGATCTCAAGAGAAGAAACACAGAAGTTAGGCTCCTAGATCCATCCTTTTCACAAGGGAGTGTCTCAAAGCCTAAAATCATTGTACAAACAACAACTGATGTGGATCTCTTAGAGGATGGATATCGATGGCGTAAATATGGACAGAAAGTTGTTAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACAACCCCAGGTTGCAATGTTCGGAAGCATGTCGAGAGGGCTTCAACGGATCGTAAAGCTGTCATGACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGACTAATAGCCACACCCTGGCTAGCAATAATAGTGCATCACAGCTAAAATCACAAAATGACATACCAGAAATGCATAATATGAACAGAAGGGGTCAGCAGCAGCCTTCCACAGTGGCACGTCTAAGGTTGAAGGAAGAAGAAGAACGTACAGCATAG 1152 0.4306 MVGGGNGEWPDGGGFSPGPMTLLSSLFGDNDDCKTFSELLAGAMSDVEHGRGRGGDGGGLSTAPPQQAQAQGYSNVQIQSEHITASLTQVPTVTFNYIPQQLIPNSEESKTKSIDYSSNSEQRLQQSSFVNFEKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPNCPVKKKVERDLVDGHVTQIIYKGEHIHQQPHPSKLTKENSNVQQELLETCDSDEEGDNETEVDYEPDLKRRNTEVRLLDPSFSQGSVSKPKIIVQTTTDVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDRKAVMTTYEGKHNHDVPAAKTNSHTLASNNSASQLKSQNDIPEMHNMNRRGQQQPSTVARLRLKEEEERTA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02340 383 Gene3D WRKY domain 123 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 Gene3D WRKY domain 254 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 353 IPR044810 GO:0003700
Trre8g02340 383 MobiDBLite consensus disorder prediction 321 383 - -
Trre8g02340 383 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 SUPERFAMILY WRKY DNA-binding domain 135 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 ProSiteProfiles WRKY domain profile. 264 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 MobiDBLite consensus disorder prediction 331 371 - -
Trre8g02340 383 FunFam WRKY transcription factor 57 255 329 - -
Trre8g02340 383 Pfam WRKY DNA -binding domain 137 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 SMART WRKY_cls 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 SMART WRKY_cls 269 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 ProSiteProfiles WRKY domain profile. 131 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g02340 383 MobiDBLite consensus disorder prediction 47 75 - -
Trre8g02340 383 FunFam WRKY transcription factor 121 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02340 Trre-Chr8 18807625 18810359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02340 12 40 WRKY Transcription Factor Family AT2G03340 68.966 1.36e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre8g02340 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02340 - - psat:127106018 574.318