Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02319 ATGGAGAGTAATACAAACTCTGAACTCCCTCCTGGTTTTAGATTTCACCCAACAGATGAGGAACTAATTGTGCATTACCTTTGTAATCAAGCCACATCAAAGCCTTGCCCTGCATCTATTATTCCAGAAGTTGATATCTATAAATTTGATCCATGGGAATTGCCTGATAAATCTGAGTTTGAAGAAAATGAATGGTATTTCTTTAGCCCAAGAGAAAGAAAGTACCCAAATGGGGTGAGGCCTAATAGAGCAACTTTATCTGGATATTGGAAAGCTACTGGCACAGACAAGGGAATCAATAGTGGATCAAAGCAAATTGGGGTGAAGAAATCTTTGGTCTTTTACAAGGGTAGGCCACCAAAGGGTATCAAAACTAATTGGATTATGCATGAGTACAGATTGATTGGATCTCAAAAACAAACTAGCAAGCATATTGGATCCATGAGGCTAGATGACTGGGTTTTGTGCAGAATCTATAAGAAGAAACACATGGGAAAAACATTGCAGCAAAAAGAGGACTATTCAACACTTCAATTTAATGATTCCACAATAGCAAATAATGATGGTGAACAAGAAATGATGAACATGAACCTTACAAGGACATGTTCCCTTACTTATCTATTGGATATGAATCACTTTGGTCCAATCTTATCTGATGGTTCAACCTTTGATTTTCAAATACACAATTCCAATATTGGAATAGACCCTTTTGTAAAACCTCAGCCACTTCAAATGACTAACTATTATGAACCAGATTCACAGAGTAGCATCACCACCAATCAGCCAATATTTGTGAAGCAAATGCATAATTATTTAGGATAA 822 0.3662 MESNTNSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSEFEENEWYFFSPRERKYPNGVRPNRATLSGYWKATGTDKGINSGSKQIGVKKSLVFYKGRPPKGIKTNWIMHEYRLIGSQKQTSKHIGSMRLDDWVLCRIYKKKHMGKTLQQKEDYSTLQFNDSTIANNDGEQEMMNMNLTRTCSLTYLLDMNHFGPILSDGSTFDFQIHNSNIGIDPFVKPQPLQMTNYYEPDSQSSITTNQPIFVKQMHNYLG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02319 273 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Trre8g02319 273 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Trre8g02319 273 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Trre8g02319 273 FunFam NAC transcription factor 18 165 - -
Trre8g02319 273 PANTHER NAC TRANSCRIPTION FACTOR 56 9 180 - -
Trre8g02319 273 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02319 Trre-Chr8 18645657 18647076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02319 1 224 NAC Transcription Factor Family AT1G69490 64.255 1.36e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre8g02319 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02319 - - gmx:100785110 405.601