Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02303 ATGGATGTGAATGAATATGCTGTTGATGGATTGTTTTCGGCGAAATCGGATGTTTTTAGCTTTGGCATTTTACTGTTGGAGGTTATATATGGCAAAATAAATAAAGCATATTATCACAGAGATGGGACTCTTAACCTTGTTGGCAAAGCATGGGCAGCGTGGAAAGAGTACAGGGCTCTAGAGTTGATTGATTCGAACATAGGTGAGACGTACATTGAATCGGACGTGTTGCGTTTTATGCACATTAGTCTCTTGTGTGTACAGCAAAATCCTCACGACAGGCTTACCATGGCGTCTGTGATTCTAATGTTGGGGAGTACTGAGATGGAATTAGGGGAGCCTAAAGGACCTGGTTTCATTTACAAAAATGTCTTAGCTGAATCAAATTTACAAGCAAATCAGAAGGATTGTAGCTCAGCAAATGAGGTGACCATTTCCTTATTAGATGCTCGATGA 456 0.4057 MDVNEYAVDGLFSAKSDVFSFGILLLEVIYGKINKAYYHRDGTLNLVGKAWAAWKEYRALELIDSNIGETYIESDVLRFMHISLLCVQQNPHDRLTMASVILMLGSTEMELGEPKGPGFIYKNVLAESNLQANQKDCSSANEVTISLLDAR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02303 151 Pfam Domain of unknown function (DUF3403) 106 151 IPR021820 GO:0004674
Trre8g02303 151 SUPERFAMILY Protein kinase-like (PK-like) 5 105 IPR011009 -
Trre8g02303 151 Pfam Protein tyrosine and serine/threonine kinase 5 101 IPR001245 GO:0004672|GO:0006468
Trre8g02303 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 151 - -
Trre8g02303 151 Gene3D Transferase(Phosphotransferase) domain 1 4 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02303 Trre-Chr8 18420477 18421010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02303 5 151 Receptor kinase-like Gene Family AT4G23320 41.176 2.09e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g02303 PK_Tyr_Ser-Thr 9.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02303 - - gmx:100802962 176.792