Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02302 ATGTTGATATATGAATACATGGCTAATGGTAGCCTAGACTCCTTCATTTTTGACAATACCAAGAATAAATTGTTAGATTGGCCAATACGGTTCCATATATTTTGTAGAATTGCTCGGGGGCTCGTGTATCTTCACCAAGATTCTCAATTAAGGATTATCCATAGAGACCTCAAAGCAAGTAATGTTTTACTTGACGATAATTGGAATCCAAAAATATCAGATTTTGGAACAGCTAGAACTTTAGGAGGAGATCAAATTGAAGGAAACACAAGGAGAATAATTGGGACTTAG 291 0.354 MLIYEYMANGSLDSFIFDNTKNKLLDWPIRFHIFCRIARGLVYLHQDSQLRIIHRDLKASNVLLDDNWNPKISDFGTARTLGGDQIEGNTRRIIGT 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02302 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Trre8g02302 96 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 96 - -
Trre8g02302 96 Pfam Protein kinase domain 2 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02302 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02302 96 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Trre8g02302 96 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 7 96 - -
Trre8g02302 96 SUPERFAMILY Protein kinase-like (PK-like) 1 94 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02302 Trre-Chr8 18420014 18420438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02302 1 96 Receptor kinase-like Gene Family AT4G04570 60.417 3.92e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g02302 Pkinase 3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02302 - - gmx:106798964 164.081