Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02299 ATGGAATTTCTTGGTTTCATGATTATAATTTCCTATATACTTGTTTACTCTATCAAATTTTCCATAGCAGATGATTCTCTTGGTTTGTCACAATCAATCAGCAATAATGATACCTTGGTGTCGAAAAGTGGAAGATTTGAACTTGGTTTCTTCACTCCAGGTAACTCTAACAAAACTTACCTTGGTATTTGGTACAAGAACATTCCTGTTCAAAATGTTGTTTGGGTTGCAAACAGAAACAGCCCCATCAATAGTACTTCAAACTACACATTAAACCTCAATAACACAGGAAACCTTGTCCTCACTCAAAACAGTACCTTTGTTTGGTACACAACGACGAACGAAAAACAAGTGCATAATCCAGTGGCGGTGCTCTTAGACAGTGGCAATCTTGTGGTAAAAAATGAAGGAGAAACAAACCAAGATGAGTATTTATGGCAGAGTTTTGATTATCCATCAGATACCTTTTTAGAAGGAATGAAATTGGGAAGGAATCTAAGAAATGGTCATGATTGGAAATTAACATCTTGGAAAAGTCCTGAAGATCCATCCATAGGAGATATTTCTTGGGGTTTAGTACTCAATGATTATCCTGAGTATTATATGATGAATGGAAGTGAAAAAGTTTTCAGGATTGGACCATGGAATGGTTTACACTTTAGTGCATTACCAGAACAAGTTTCAAACTCGTTCATAGATTACAAGATTGTTTCCAACAATGATGAAATCTTCTATTCATACAGCATCAAGATCAATACTGTTATTTCAAAAGTAGTAGTCGACCAAACAAAAGAACATCGTTATGTATGGGATGAACAAGAACATAATTGGAGGACATATGTAACACTTCCCAAAGATTTTTGTGACACTTATGGTCTTTGTGGACCTTATGGAAATTGCATAATGACACAACAACAGGTTTGTCAGTGTTTCAATGGGTTTAGTCCAAAGTCACCACAAACATGGATAGCATCTGATTGGAGTCAAGGATGTGTGCGTGATAAACATTTGAGTTGCAAGCACAATCACACAAACAAAGACGGGTTTGTCAAATTTCAAGGCCTAAAAGTTCCGGATACTACACATACTTGGTTGAACGTTAGTATGAGTCTAAAGGAATGCAGAGAAAAATGTTTGAACAATTGTTCTTGTATGGCTTATACAAATTCAAACATAAGTGGAGAAGGTAGTGGTTGTGTTATGTGGTTTGGTGATCTAATTGACATAAGACAGTTTCAAGATGGTGGACAAGATCTCTATATTCGGATGTTTGGTTCCGAGTTAGTCAACAGTGAAGAACCTGAACATAGGCACAAAAGGAACAACACAGCGGCCAAAGTATCTACCATTGTTATTTTAGTTTTTGGGGTGCTTTTGGTGTGTATTTATTTAATCTGCAGAGTTCAGAAGAAGACTGTAGATAAAAATCCGGACAGATCAGAAAGGCATGTAGATGATCTTGATCTCCCATTGTTTGACCTGCCAACAATTTCCACTGCAACTAATGGCTTCTCCAAAAACAATAAAATTGGCAAAGGTGGTTTTGGAACTGTGTATAAGGGAAAATTAACCAATGATCAAGAAATTGCTGTTAAGAGACGTTCAAGAGAACAAATGTTGATTTATGAATATATGGTTAATGGTAGCCTAGACTCCTTCATTTTCGACAATACCAAGAGTAAATTGTTAGATTGGCCAAAACGATTCAACATAATTTGTGGAATTGCTAGGGGACTTTTGTATCTTCACCAAGATTCTCGATTAAGGATTATCCATAGAGACCTTAAAGCAAGTAATGTTTTACTCGACGATAGTTTGAATCCAAAAATATCCGATTTTGGAACAGCTAGAACTTTCGGAGGAGACCATTACGAAGGAAACACAAAGAGAATAATTGGGACTTATGGGTACATGGCACCAGAGTATGCTGTTGATGGATTGTTTTCGGTGAAATCTGACGTTTTTAGCTTCGGAATTTTATTATTGGAGATTATATGTGGCAAAAGAAATAGAGCATATTATCACACAGATGGGACTCTAAACCTTGTTGGCCAAGCATGGTCAGTGTGGAAAGAGAATACAGCTATAGAGTTGATTGACACAAACATAGGTGAAACTTTTGTTGTATCGGAAGTGTTGCGTTGTATGCACGTTAGTCTCTTATGTGTACAGCAGAATCCTGAAGATAGGCCTACAATGGCCTCTGTGATTCTAATGTTGGGGAGTACTGAGATGGAATTAGGGGAACCTAAAGAACCTGGTTTCATTTCCAAAAATGTTTCAACAGAATCAAATTCATCGACCAATGCAAAAGATTGTAGTTCGGTAAATGAAATGACCATTACCTTATTAGATGCTCGATGA 2364 0.3676 MEFLGFMIIISYILVYSIKFSIADDSLGLSQSISNNDTLVSKSGRFELGFFTPGNSNKTYLGIWYKNIPVQNVVWVANRNSPINSTSNYTLNLNNTGNLVLTQNSTFVWYTTTNEKQVHNPVAVLLDSGNLVVKNEGETNQDEYLWQSFDYPSDTFLEGMKLGRNLRNGHDWKLTSWKSPEDPSIGDISWGLVLNDYPEYYMMNGSEKVFRIGPWNGLHFSALPEQVSNSFIDYKIVSNNDEIFYSYSIKINTVISKVVVDQTKEHRYVWDEQEHNWRTYVTLPKDFCDTYGLCGPYGNCIMTQQQVCQCFNGFSPKSPQTWIASDWSQGCVRDKHLSCKHNHTNKDGFVKFQGLKVPDTTHTWLNVSMSLKECREKCLNNCSCMAYTNSNISGEGSGCVMWFGDLIDIRQFQDGGQDLYIRMFGSELVNSEEPEHRHKRNNTAAKVSTIVILVFGVLLVCIYLICRVQKKTVDKNPDRSERHVDDLDLPLFDLPTISTATNGFSKNNKIGKGGFGTVYKGKLTNDQEIAVKRRSREQMLIYEYMVNGSLDSFIFDNTKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDSLNPKISDFGTARTFGGDHYEGNTKRIIGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRNRAYYHTDGTLNLVGQAWSVWKENTAIELIDTNIGETFVVSEVLRCMHVSLLCVQQNPEDRPTMASVILMLGSTEMELGEPKEPGFISKNVSTESNSSTNAKDCSSVNEMTITLLDAR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02299 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 545 748 - -
Trre8g02299 787 Gene3D Transferase(Phosphotransferase) domain 1 546 753 - -
Trre8g02299 787 Gene3D - 19 149 IPR036426 -
Trre8g02299 787 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Trre8g02299 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 423 - -
Trre8g02299 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Trre8g02299 787 CDD PAN_AP_plant 336 422 - -
Trre8g02299 787 ProSiteProfiles PAN/Apple domain profile. 339 424 IPR003609 -
Trre8g02299 787 SMART blect_4 30 152 IPR001480 -
Trre8g02299 787 Pfam Domain of unknown function (DUF3403) 742 787 IPR021820 GO:0004674
Trre8g02299 787 Pfam PAN-like domain 343 409 IPR003609 -
Trre8g02299 787 SUPERFAMILY Protein kinase-like (PK-like) 490 761 IPR011009 -
Trre8g02299 787 Gene3D Hepatocyte Growth Factor 341 421 - -
Trre8g02299 787 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Trre8g02299 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Trre8g02299 787 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 731 - -
Trre8g02299 787 CDD B_lectin 30 152 IPR001480 -
Trre8g02299 787 SMART serkin_6 504 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02299 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Trre8g02299 787 PIRSF SRK 1 538 IPR024171 GO:0004674
Trre8g02299 787 PIRSF SRK 534 787 IPR024171 GO:0004674
Trre8g02299 787 SMART ntp_6 344 423 IPR003609 -
Trre8g02299 787 Pfam Protein tyrosine and serine/threonine kinase 534 737 IPR001245 GO:0004672|GO:0006468
Trre8g02299 787 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre8g02299 787 ProSiteProfiles Protein kinase domain profile. 387 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02299 787 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Trre8g02299 787 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Trre8g02299 787 Gene3D Phosphorylase Kinase; domain 1 466 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02299 Trre-Chr8 18407098 18410272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02299 450 755 Receptor kinase-like Gene Family AT4G23230 48.094 2.28e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g02299 PK_Tyr_Ser-Thr 6.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02299 - - cave:132173746 874.774