Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02295 ATGGAGAGTTCAAACAATTTGGATAACTGTGATGGTAATTTTGATGACGAAGCTAATAGAGTTGATAACTCTAGTGGTGAACTTGCAAATTGGGAGCCTGTAACAGGGATGTCTTTTCCTTCTATAGATGAGGTGAAATTATTTTATAAAAAGTATGCTTCTATAAAGGGTTTTGGATGGAAGACTAGAACATCAAAGAAAGGAAAGAATGGAGAGATAAATTACATAATGTTATCATGCACAAGAGAAGGACATCGTGTGTCTGAAATTCTGTGTACATTGAAGACGCTTCCGACTAAGGTGAAAAATTGCCCTGCAAAGATTACTACAAAGTTGGAAAAGGATGGATTATGGTATATTAAGATGTTTGAACCTAACCACTCTCACACACTTAGCCCTACAAAGTCAAGGTTTTTCAAGACTAACAAAAATATCAACATGCATGTACAAAGAACAATCCAAATCAATGATGATGCAGGGGTGAGGACCAACAAAACTTTTCAATCTCTTGTTACAGATGTTGGAGGTCATGAAAATATAACATTTTGTGAAAGAGATGTGAGGAATTATATTAACAAGGAAAGACGTGTCATTGGAAAAGGTGACTTGGATGATGATTTTCATGTACGAAATGTGTTTTGGGCTGATGCAAGAAGCAGAGCTGCGTATGAATCTTTTGGAGATGTTGTAACTTTTGATACAACATATTTGACCAATAAGTATGATATGCCTTTTGCTGCATTTGTTGGTGTAAATCATCATGGTCAATCAACTTTACTTGGTTGTGGCCTGCTTTCTGCTGAAGACACAGAGTCATTTGTGTGGCTTTTTCAATCTTGGCTTCGTTGTATGTTAGGAAAGGCTCCAACAGGTATTGTCACTGACCAATGTAAGGCTATGAAAAATGCCATTGAGTTAGTCTTCCCTACGACTACGCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTCCTGAAAAGCTAAGTAGATATAGTGAATACAAAAAGATTAGGTGTGAAATGAAAGAAGTAGTTTATGATACAATCACATTAACTGAATTTGAAGAAAAATGGTGTTCTTTTGTCAACAAATTTGAGTTGGAACATAATGATTGGTTGAGTGGGTTGTACAGAGAGCGTCATAGATGGGTACCAATTATGTTGAAGAAATATTTTTGGGCAGGTATGTCGACAACACAACGAAGTGAGAGCATACATGCTTTCTTTGATGGATATATCAATTCAACAACTAGTTTGCATCAATTTGTAAAACAATATGATAATGCTTTAAGAAGTAGAGCAGAAAAGGAATTTGAAGCTGATTTTCAATCCATGAACACAATAATTCCTTGTGGATCAACCTCGTCCATCGAAAAGCAATTCCAAGAAGAATATACTCATGCCAAGTTTAAGGAGGTTCAGGAAGAATTTAGAGCTAAAATGAATTGTGCTACATCCTTAAATAATGTGGAGGGTGACTATGCTAACTACTATGTGTTAGAGGAGATACTAGTTGGTGATAGAACAAAAGATCGCATCTTTAAAGTTTCTTTTAATCGTCACAATCATGATATTAGTTGTGAATGCTTGTTGTTTGAATTTAGAGGTATTTTATGTCGTCATGTGCTCTGTGTATGTACTCAAGAAAGGGTTAAAAATGTTCCGGTGAAGTATGTTTTAGCAAGATGGAGCAAAAATATTAAAAGAAAACATTCATATATAAAGAGCAGCTATAGTGTCACAAAATTGAAGCCACAAATGGACAGGTTTGACAAGTTGTGCAAACATTTCTATGAAGTTGCTGAAGAAGCTGCAGAGTTTGAAGATGCAACTAAGGTTCTCCATGAAAGATTATCTGAATTTAAATCTAATTTGTCTTCCTTGAGAGCTACAAATAATGATGTTAACCGAAGTTCCAACAATGACTTAAATCAAAATAACATTACTAGGATGGATGAAAATTTGACTATTGAAATTCGTAGTCCATTGCGAGTCACACGTAAAGGTCGTCCTCGAGAAAAGAGAACAATATCTGCAGTTGAAAAGGTTGTGCAAAGATGCAAGAAGAAGCGAACAAATAAAAGTAGAGACAAATCGACAACTAAGGCACGTTCTTGTTTTCAAATAGTATACCAACCATTTTGGTTAATGTTATCATCTTATTTATTTTTGCCCAATTGTGTAGGAATGCAATACTGA 2199 0.3506 MESSNNLDNCDGNFDDEANRVDNSSGELANWEPVTGMSFPSIDEVKLFYKKYASIKGFGWKTRTSKKGKNGEINYIMLSCTREGHRVSEILCTLKTLPTKVKNCPAKITTKLEKDGLWYIKMFEPNHSHTLSPTKSRFFKTNKNINMHVQRTIQINDDAGVRTNKTFQSLVTDVGGHENITFCERDVRNYINKERRVIGKGDLDDDFHVRNVFWADARSRAAYESFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGQSTLLGCGLLSAEDTESFVWLFQSWLRCMLGKAPTGIVTDQCKAMKNAIELVFPTTTHRWCLWHIMKKIPEKLSRYSEYKKIRCEMKEVVYDTITLTEFEEKWCSFVNKFELEHNDWLSGLYRERHRWVPIMLKKYFWAGMSTTQRSESIHAFFDGYINSTTSLHQFVKQYDNALRSRAEKEFEADFQSMNTIIPCGSTSSIEKQFQEEYTHAKFKEVQEEFRAKMNCATSLNNVEGDYANYYVLEEILVGDRTKDRIFKVSFNRHNHDISCECLLFEFRGILCRHVLCVCTQERVKNVPVKYVLARWSKNIKRKHSYIKSSYSVTKLKPQMDRFDKLCKHFYEVAEEAAEFEDATKVLHERLSEFKSNLSSLRATNNDVNRSSNNDLNQNNITRMDENLTIEIRSPLRVTRKGRPREKRTISAVEKVVQRCKKKRTNKSRDKSTTKARSCFQIVYQPFWLMLSSYLFLPNCVGMQY 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02295 732 ProSiteProfiles Zinc finger SWIM-type profile. 514 550 IPR007527 GO:0008270
Trre8g02295 732 SMART 26again6 525 552 IPR006564 GO:0008270
Trre8g02295 732 Pfam FAR1 DNA-binding domain 48 132 IPR004330 -
Trre8g02295 732 Pfam SWIM zinc finger 524 546 IPR007527 GO:0008270
Trre8g02295 732 Pfam MULE transposase domain 229 323 IPR018289 -
Trre8g02295 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 625 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02295 Trre-Chr8 18373733 18376003 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g02295 MULE 2.3e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02295 - - psat:127087122 969.918