Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02279 ATGGTAACCAAAATTCAAAACTACCCTCCATTATCACTCTCACCCACATCTCCAACTCCTTCAAAGTTTCAGAATTTTGTGGGAGATAACTATATTGTAGAAAAAATGGTGGAGACTCCGGTTAATGGAAGAATAAGGCAAGCTTTTACGATTGTAAATGGTGGGCACGATGTTGGCCTAACTAGTGCTCCTCCGAGCAATGCTGGATCGGATTATGGTATAATAGAGTTCACAAGAGAAGATGTAGAAGCATTGCTGAATGAAAAAGCCAAAAGGAAAGAAAGGTTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACATTGAGATGAGCTACTCTATAGAGCAGGAAAAGTTAAAGAATTCACTGGAAATGACCCAGCAAAAAAGTATAGAAATTGAGTTACTGCTTAAGATTAAGGAAGAGGAACTGAATTTAATTATTACAGAAATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCTGAGAAGTCGGCTGCAGTGGAATCTCTTGTTAAAGAGAGAGAGGCAAGGCTTGATATTGAAAGGTCACATACCACTCTTTCCGAGGACCTCGGAAGAACCGAACGAGAGATTGAAAGTGCAAATCAGAAGATATCATCACTGAATGAAATGTATAAGCGGTTACAAGAATACATAACAAGTTTACAACAGTACAATGGAAAGCTTCATACAGAGCTTTCATCAGTTGAAGATGAACTCAAACGTGTAGAGAAAGAGAAAACTACTGCCGCGGAGAACATCGCCATGTTAAGGGGTCAACTTACTTTATCTATTTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGCTCTTGCAAGTGAAGTTTATTCTATGAGGGGAGAGTTGAAACAAGTAAGAGATGATAGAGACTGTCAATTATCTCGCGCGCAAACTTTAAATGATGATTTGATGAAATTAAAAGAAACTAGGGAAAACTCTTCCATTGAATTGGACAGCTTGACTTTAAAAGCAAGTGAACTGGAGGAAAAAACTTCTTTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCTGCCGAGAAGAAATTGCAGGTGACTGATATATCTGTATTTGAGACAAGAACAGAATTTGAAGGGCAACAAAAACGTGTTGATGAGTTGCAAAGACGGTTGGTAGATGCAGAATTTAAACTTATAGAAGGGGAGAGTCTGCGGAAAAAATTACACAATACCATTTTAGAGTTAAAAGGGAACATCCGTGTATTCTGTCGGGTGAGGCCTTTGTTGTCCGATGAAAGTCGCAGCACAGAAGGCAAGATATTCAGTTATCCAACAACGACGGAAGCTTCTGGAAGAGGAATTGATCTATCTCAAAATGGCCAGAAACATTCTTTTACATTTGATAAAGTTTTTATACAAGATGTATCACAAGAAGAAATTTTTGTAGAAGTTTCACAACTTGTACAAAGTGCTCTTGATGGTTATAAGGTCTGCATCTTTGCCTACGGTCAAACAGGATCGGGGAAAACCTATACAATGATGGGAAAACCTGGACATCCAGACGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTTCAAACGAAACAGTCTCAGCAACCTCAAGGCTGGAAATACGAGATGCAGGTGTCCATGTTGGAAATATACAATGAAACCATTCGTGATCTGCTATCTACAAACAGATCATCGCATGATGCAACGCGCCTTGAAAATGGTACTCCTGGAAAGCAATATACAATCAAACATGATGCAAATGGAAATACACAAGTTTCTGATCTTACAGTAGTAGATGTTCACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCACATAGCAGATCGGTGGGAAAAACTCAGATGAATGAACAATCATCAAGAAGTCATTTTGTGTTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGATCAACAAGTACAAGGTGTTCTTAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTAAAAGAAACTCAAGCAATCAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGAAACTCAAAGCTTACATATCTACTTCAACCTTGTCTGGGTGGAGACTCGAAGACGTTAATGTTTGTAAACATTTCACCTGACCCTTCTTCGGTTGGCGAGTCACTATGCTCACTCCGGTTTGCTTCGAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGTGCGACAGACTCTCGTTTGAGCTATTTCTGA 2388 0.3911 MVTKIQNYPPLSLSPTSPTPSKFQNFVGDNYIVEKMVETPVNGRIRQAFTIVNGGHDVGLTSAPPSNAGSDYGIIEFTREDVEALLNEKAKRKERFNYKERCENMVDYIKRLKVCIRWFQDIEMSYSIEQEKLKNSLEMTQQKSIEIELLLKIKEEELNLIITEMRKNCTSLQEKLIKEEAEKSAAVESLVKEREARLDIERSHTTLSEDLGRTEREIESANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKTTAAENIAMLRGQLTLSISSQEEATKQKDALASEVYSMRGELKQVRDDRDCQLSRAQTLNDDLMKLKETRENSSIELDSLTLKASELEEKTSLKENQIKALQEKLAAAEKKLQVTDISVFETRTEFEGQQKRVDELQRRLVDAEFKLIEGESLRKKLHNTILELKGNIRVFCRVRPLLSDESRSTEGKIFSYPTTTEASGRGIDLSQNGQKHSFTFDKVFIQDVSQEEIFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSHDATRLENGTPGKQYTIKHDANGNTQVSDLTVVDVHSAKEVAFLLNQAAHSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02279 795 Pfam Kinesin motor domain 440 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g02279 795 CDD KISc_C_terminal 432 776 - -
Trre8g02279 795 Coils Coil 162 182 - -
Trre8g02279 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 772 IPR027417 -
Trre8g02279 795 Coils Coil 323 385 - -
Trre8g02279 795 Coils Coil 246 280 - -
Trre8g02279 795 PRINTS Kinesin heavy chain signature 675 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g02279 795 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g02279 795 PRINTS Kinesin heavy chain signature 724 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g02279 795 PRINTS Kinesin heavy chain signature 644 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g02279 795 SUPERFAMILY Tropomyosin 292 436 - -
Trre8g02279 795 Coils Coil 75 95 - -
Trre8g02279 795 FunFam Kinesin-like protein 380 776 - -
Trre8g02279 795 Coils Coil 393 413 - -
Trre8g02279 795 ProSiteProfiles Kinesin motor domain profile. 434 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g02279 795 PANTHER KINESIN-LIKE PROTEIN KLP-3 284 781 IPR027640 GO:0003777|GO:0007018
Trre8g02279 795 Coils Coil 204 238 - -
Trre8g02279 795 ProSitePatterns Kinesin motor domain signature. 674 685 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre8g02279 795 Gene3D Kinesin motor domain 378 776 IPR036961 -
Trre8g02279 795 SMART kinesin_4 432 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02279 Trre-Chr8 18247742 18252575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02279 103 771 Calmodulin-binding Proteins AT5G65930 33.333 2.08e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02279 K10405 - gmx:100784221 1286.94