Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02272 ATGAAGCTTTTAAATAAGAATCAAGGATGTGTAAAACTTGTGCAGATAGATTCATCTATTGGTATTCTAAGAGAGCTTGTTTTCTTGAATTTGAAGAATTGTGAAAACCTTATATGCATACCCAACGAAATATCTGGTCTCACTGCTCTTAAATCTTTAAAACTTTGTGGCTGTTCCAAAGCGTTTAACAATCCCAAAGCACGTGAAGATTTTTCTAGTTGTGTGTTGCCTTCCTTGCCTAGTTTCTCTTGTTTGACTGAACTGGATATCAGTTTTTGCAGACTAAGCCAAATTCCTGACGCTCTTGGATGTCTAACTTGGTTAGAAAGATTAAATTTGAGGGGAAACAATTTTGTCATATTGCCTAGCCTCCAGAATCTTTCCAAACTTGAATACCTAAATTTGGAGCATTGCAAGCAGTTGACATCTTTGCCTGAGCTCCCTTCGCCTGCCGCTATCGAGAAGGATAAACTTAAGAGAGTAGGAATGTATATTTTCAACTGTCCTGAATTGGGTGAGAGGGAACATTGCACTAGCATGGCTTTTTCATGGATAACAAATTTCATTCAAGCAAATCAAAATTCTTGTGCCTCCTTTCATCAGATTGATATTGTTATTCCTGGAAGTGAAATTCCAAGTTGGTTCAACAGTTGGAAAATGGGTAGATCAATAAGCATAGACCCATCTCCTATTGTGTATGACGATAACATCATTGGCATTGCTTGCTGTGCCGTATTTTCTGTGCAACCTTTTGATCCAACTAAGACAAGATATGAATGGGGACCTGTAGTACGGTTAGGTTTTAAGAGCAGCAATGGTGCCAACAGCGATTATGTTGTCATTCCAGTAACTCTGTATAGACATCTTGTTACGGTCAAATCAAATCACATGTGGCTAATCTATTTTGATCGGGAATTATTCTTCAGTTTTCTGAGATCTATAGACAATACACTATGGGAACTTGATCATATCGTAATGGAAGCTTCCGTTACGAATGGCCAAGGCCTGCATCTGGAGAGTGAGGAAACTCTTGTGCTCCAATCTACAACGCATATGGTGATTGAAGATGAGGCACAGCCACAATAG 1086 0.3886 MKLLNKNQGCVKLVQIDSSIGILRELVFLNLKNCENLICIPNEISGLTALKSLKLCGCSKAFNNPKAREDFSSCVLPSLPSFSCLTELDISFCRLSQIPDALGCLTWLERLNLRGNNFVILPSLQNLSKLEYLNLEHCKQLTSLPELPSPAAIEKDKLKRVGMYIFNCPELGEREHCTSMAFSWITNFIQANQNSCASFHQIDIVIPGSEIPSWFNSWKMGRSISIDPSPIVYDDNIIGIACCAVFSVQPFDPTKTRYEWGPVVRLGFKSSNGANSDYVVIPVTLYRHLVTVKSNHMWLIYFDRELFFSFLRSIDNTLWELDHIVMEASVTNGQGLHLESEETLVLQSTTHMVIEDEAQPQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02272 361 Gene3D Ribonuclease Inhibitor 6 70 IPR032675 -
Trre8g02272 361 Gene3D Ribonuclease Inhibitor 71 190 IPR032675 -
Trre8g02272 361 Pfam C-JID domain 206 308 IPR045344 -
Trre8g02272 361 Pfam Leucine rich repeat 85 139 IPR001611 GO:0005515
Trre8g02272 361 PANTHER LEUCINE-RICH REPEAT-CONTAINING 12 206 - -
Trre8g02272 361 SUPERFAMILY RNI-like 13 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02272 Trre-Chr8 18190264 18191422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02272 8 146 WRKY Transcription Factor Family AT4G12020 34.752 5.59e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02272 - - mtr:11441353 570.852