Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02271 ATGTTTAAGCCTATATTAAATGTTAGTTTCTTGAACAATTATGCACCGAGATCTGTAAGAGGAGGTCCACCTGTCCTAACCCCCGGTATGAAGCTTTTAAATAAGAATCAAGGATGTGTAAAACTTGTGCAGATAGATTCATCTATTGGTATTCTAAGAGAGCTTGTTTTCTTGAATTTGAAGAATTGTGAAAACCTTATATGCATACCCAACGAAATATCTGGTCTCACTGCTCTTAAATCTTTAAAACTTTGTGGCTGTTCCAAAGCGTTTAACAATCCCAAAGCACGTGAAGATTTTTCTAGTTGTGTGTTGCCTTCCTTGCCTAGTTTCTCTTGTTTGACTGAACTGGATATCAGTTTTTGCAGACTAAGCCAAATTCCTGACGCTCTTGGATGTCTAACTTGGTTAGAAAGATTAAATTTGAGGGGAAACAATTTTGTCATATTGCCTAGCCTCCAGAATCTTTCCAAACTTGAATACCTAAATTTGGAGCATTGCAAGCAGTTGACATCTTTGCCTGAGCTCCCTTCGCCTGCCGCTATCGAGAAGGATAAACTTAAGAGAGTAGGAATGTATATTTTCAACTGTCCTGAATTGGGTGAGAGGGAACATTGCACTAGCATGGCTTTTTCATGGATAACAAATTTCATTCAAGCAAATCAAAATTCTTGTGCCTCCTTTCATCAGATTGATATTGTTATTCCTGGAAGTGAAATTCCAAGTTGGTTCAACAGTTGGAAAATGGGTAGATCAATAAGCATAGACCCATCTCCTATTGTGTATGACGATAACATCATTGGCATTGCTTGCTGTGCCGTATTTTCTGTGCAACCTTTTGATCCAACTAAGACAAGATATGAATGGGGACCTGTAGTACGGTTAGGTTTTAAGAGCAGCAATGGTGCCAACAGCGATTATGTTGTCATTCCAGTAACTCTGTATAGACATCTTGTTACGGTCAAATCAAATCACATGTGGCTAATCTATTTTGATCGGGAATTATTCTTCAGTTTTCTGAGATCTATAGACAATACACTATGGGAACTTGATCATATCGTAATGGAAGCTTCCGTTACGAATGGCCAAGGCCTGCATCTGGAGAGTGAGGAAACTCTTGTGCTCCAATCTACAACGCATATGGTGATTGAAGATGAGGCACAGCCACAATAG 1173 0.3905 MFKPILNVSFLNNYAPRSVRGGPPVLTPGMKLLNKNQGCVKLVQIDSSIGILRELVFLNLKNCENLICIPNEISGLTALKSLKLCGCSKAFNNPKAREDFSSCVLPSLPSFSCLTELDISFCRLSQIPDALGCLTWLERLNLRGNNFVILPSLQNLSKLEYLNLEHCKQLTSLPELPSPAAIEKDKLKRVGMYIFNCPELGEREHCTSMAFSWITNFIQANQNSCASFHQIDIVIPGSEIPSWFNSWKMGRSISIDPSPIVYDDNIIGIACCAVFSVQPFDPTKTRYEWGPVVRLGFKSSNGANSDYVVIPVTLYRHLVTVKSNHMWLIYFDRELFFSFLRSIDNTLWELDHIVMEASVTNGQGLHLESEETLVLQSTTHMVIEDEAQPQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02271 390 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Trre8g02271 390 PANTHER LEUCINE-RICH REPEAT-CONTAINING 41 235 - -
Trre8g02271 390 Pfam Leucine rich repeat 114 168 IPR001611 GO:0005515
Trre8g02271 390 Pfam C-JID domain 235 337 IPR045344 -
Trre8g02271 390 SUPERFAMILY RNI-like 42 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02271 Trre-Chr8 18190177 18191422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02271 37 175 WRKY Transcription Factor Family AT4G12020 34.752 7.45e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02271 - - mtr:11441353 573.548