Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02270 ATGGAAAAGAATGTTGAAGCCATAGTTTTGTACAATGAACGTGACGAAGGGATGGGTTTAGCGATGGATGCAGCGATGGTTGAATACTTTTCAAATCTTAGATTGCTCATCATCAGGTATGTGAATGGATACATGAATGCATCAGGAAGCCTCAGTTGTCTATCCAACGAATTAAGATATGTTGAATGGTTGGATTATCCATTCAAGTATTTGCCATCAAGTTTTCAGCCCAATCAACTTGTCGAGTTGATATTGTTTGAGAGTAGCATCGAACAACTATGGAAAGGAAAAAAGGTGATGTCTCAAAGAGTAATTGCGGATGCCTTGACCATGATGGCTAATGCCATGGCTCAAGAAGCGACTAATAGGAATGCCGAGAGGGTTGCTCAAGAGACCCTTCGAGGAAATGAAGATGAGTCAAGATTGGAGCGGTTCTTGAGGAACAATCCACAAGCTTTCAAGGGTGGACATGACCCCGATGGTGCTATCAAGTGGCTAGAAGCTATGGAAAGGATTTTCGGAGCAATGAGGTGCTCGGAAACACAAAAGATGGTGCGGACCAAGTGGACAATCTCATTAGAGCATCTGCCCAATTTGAGACATTTGTGTCTATGCTATTCCAAAAATCTAATAGAGATACCAAATTTTGAAGAGTTCCCGAATCTTGAGCTATTAAATCTGGCAGGATGTGTAAAACTTGTGAAGTTGGATCCTTCTATTGGACTTCTAAGAAAGATTTTTTACTTGAATTTGGAAAAGTGCGTGAGTCTAATAAGCATACCCAACACCATATTTGGTCTCAGCTCTCTTAAATACATAAGCATGAGTGGGTGTTCCAAAGTTTCGTTTAACAATCCATGGCATTTGAATATAATTGAAAGGACATCACATTCAAATGTACCACACCGCATTATCATTCCTTTTATCCCACTCCCGAAGCGCGCAAAATGGTTATATTGTATGAGTTCAATTGATATTAGTTTTTGTGGTCTAACCCAACTTCCTGATGCAATTGGATGCCTACATCAGCTACAAAGTTTAAATCTTGGTGGAAACTATTTTGTGTCACTACTCAGCTTGAATGAACTTTCCAAACTTGTATATTTAAACTTGGAGCATTGCGTGTTTTTGGAATCTTTGCCTCAGCTTCCTTTTCCTACTGCTCTTAATTGGGATCTTGGCATTAACAAAATAGGATTGCACATTTTTAATTGTCCTAAATTGGGTGAGAGGGAATGTAGAATTGCATTTTCATGGTTGAAACAATTCATTCAAGCAAACCCACAATGCTCTCATGCCATTGATATTGTTATTCCTGGAAGTGAAATACCGAATTGGTTCAACAATCAAAGTGAGGGTAATAGAATACTGATAGACTACTCTCCCATTAAGCTTGACATTAACAATCATATCATTGGCTTTCTATGTTGTTCACTATTTTCTGTGCCACCTAGTACTCGTCCAATAAATACACAACATCGAAAAATTGCACTCATGCTTAAACTTCAAAATTGGCCAGACCATCAAAATTTAATTCTAGTATCTGACAAAGAACGGGATCTTATTAAGGTCAAAACAAATCACATTTGGCTAACCTATTTCCCCCGGAAGTTGTCCCGGATCTACAAGAGTTTCAACTTAACAACAATGCATCCTGGAAACTCCTCAGCTCTGAAGCACAACTGGGTTCACATGCACTTTCATCCAACTACCTTGTTGGTTGAAAATAAGGGAGACACGTTCAACAAACATGGAGATTCACAACAAGACCATGAAGAGTCTCAACTCTCAACAAATGGATAA 1803 0.3894 MEKNVEAIVLYNERDEGMGLAMDAAMVEYFSNLRLLIIRYVNGYMNASGSLSCLSNELRYVEWLDYPFKYLPSSFQPNQLVELILFESSIEQLWKGKKVMSQRVIADALTMMANAMAQEATNRNAERVAQETLRGNEDESRLERFLRNNPQAFKGGHDPDGAIKWLEAMERIFGAMRCSETQKMVRTKWTISLEHLPNLRHLCLCYSKNLIEIPNFEEFPNLELLNLAGCVKLVKLDPSIGLLRKIFYLNLEKCVSLISIPNTIFGLSSLKYISMSGCSKVSFNNPWHLNIIERTSHSNVPHRIIIPFIPLPKRAKWLYCMSSIDISFCGLTQLPDAIGCLHQLQSLNLGGNYFVSLLSLNELSKLVYLNLEHCVFLESLPQLPFPTALNWDLGINKIGLHIFNCPKLGERECRIAFSWLKQFIQANPQCSHAIDIVIPGSEIPNWFNNQSEGNRILIDYSPIKLDINNHIIGFLCCSLFSVPPSTRPINTQHRKIALMLKLQNWPDHQNLILVSDKERDLIKVKTNHIWLTYFPRKLSRIYKSFNLTTMHPGNSSALKHNWVHMHFHPTTLLVENKGDTFNKHGDSQQDHEESQLSTNG 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02270 600 Gene3D Ribonuclease Inhibitor 299 427 IPR032675 -
Trre8g02270 600 Gene3D Ribonuclease Inhibitor 183 295 IPR032675 -
Trre8g02270 600 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 406 IPR044974 GO:0006952
Trre8g02270 600 SUPERFAMILY RNI-like 4 425 - -
Trre8g02270 600 ProSiteProfiles Leucine-rich repeat profile. 343 364 IPR001611 GO:0005515
Trre8g02270 600 MobiDBLite consensus disorder prediction 578 600 - -
Trre8g02270 600 Pfam C-JID domain 438 531 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02270 Trre-Chr8 18176052 18188547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02270 13 281 WRKY Transcription Factor Family AT5G45050 27.575 2.90e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02270 - - tpra:123883787 353.599