Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02265 ATGTCGGATCATATGGAAAAGAATGTTGAAGCCATAGTTTTGAAAGTTGATGGTCCTGGCGAAGAAGAAGGGATAATGGAAGATGCAGTGGTGATGGTTGAATACTTTTCAAATCTTAGATTGCTCATCATCAAGTTCATCAAGAATGCGAATATATCACGAAGCCTCTGTCGTCTTTCTAACGAATTAAGATATGTTGAATGGTCGTATTATCCATTCAAGTATTTTCCATCAAGTTTTCAGCCCATTCATCTTGTTGAGTTGATATTGGTGCATAGTAGCATCAAACAACTATGGAAAGGCAAAAAGAATCTGCCCAATTTGAGATATTTGTGTCTACGCGATTCCAAAAATCTAATAGAGATACCAAATTTTGAAGAGTTTCCGAATCTTGAGCAGTTAAATCTAGAAGGATGTGAAAGCCTTGTGAAGTTGGATTCTTCTATTGGACTTCTAAGAAAGATTGTTTACTTGAATTTGAAAAGGTGCCGAAGTCTAATAAGCATACCCAACATCATATTTGGGATGAGCTCTCTTAAATACATAAACATGAAGTGGTGTTCCAAAGCGTCGTTTAACGATCATTCCCTGCAGTCAACAACTTCGACATCTTCAAATGCACCACACTGCATTATCGGTAATTGTTCCCCACTCCCGAAGTACCCAGTATATTGGTTAAATTGTTTGAGTGAAATTGATATAAGTTTTTGTGGTCTAAGCCAACTCCCTGATGCAATTGGATGCCTATGTCAGCTACAAAGTTTAAATCTTGAGGGAAACTATTTTGTGTCACTACCCAGCCTGAATGAGTTTTCCAAACTTATATATTTAAACTTGAATCATTGCAAATTTTTGGAATCTTTGCCTCAGCTTCCTTTTCCTACTGCTATCAATTGGGATCTCTACCGATATCATTTGAATGTAGGATTGAACATTTTCAACTGTCCTAAATTGGGTGAGAGGGAATGTAGAATTGCATTTTCATGGTTGAAACAATTCATTCAAGCAAACCCACAATGCCCTCATGTGATTCATATTCTCATTCCTGGAAGTGAAATACCAACTTGGTTCAACAATCAAAGCGAGGGTGATAAAATACTGATAGACTACTCACCCATTAAGCATGACATTAACAATCATATAATTCGCGGCCTTCTATGTTGTTCACTATTTTCTGTGGAACCTAATTATTATCCAATTGAAATCAGGATTATACTTCATTTAACTGGTTTTTACTTAGATGGTCCAGTGAACAAGTTTCCTCCACGAGATCATCAAAATCATGATCCCGTAGTTTACGGAGATCTTATTAAGGTCAAAACAAATCACATTTGGCTAACTTATTTCCCCCGGAAGTTGTCCTGGTATGTTCCAGACATTCATGGCACAATGGATGTTAAATTTGATTACCATGATTTTTGTGGGATTAGAAATGAGGTGAAGAATTGCGGATATGGCTGGCTGTTGGAACAAAGTGGGTATGACATGAACCTCTAA 1497 0.3701 MSDHMEKNVEAIVLKVDGPGEEEGIMEDAVVMVEYFSNLRLLIIKFIKNANISRSLCRLSNELRYVEWSYYPFKYFPSSFQPIHLVELILVHSSIKQLWKGKKNLPNLRYLCLRDSKNLIEIPNFEEFPNLEQLNLEGCESLVKLDSSIGLLRKIVYLNLKRCRSLISIPNIIFGMSSLKYINMKWCSKASFNDHSLQSTTSTSSNAPHCIIGNCSPLPKYPVYWLNCLSEIDISFCGLSQLPDAIGCLCQLQSLNLEGNYFVSLPSLNEFSKLIYLNLNHCKFLESLPQLPFPTAINWDLYRYHLNVGLNIFNCPKLGERECRIAFSWLKQFIQANPQCPHVIHILIPGSEIPTWFNNQSEGDKILIDYSPIKHDINNHIIRGLLCCSLFSVEPNYYPIEIRIILHLTGFYLDGPVNKFPPRDHQNHDPVVYGDLIKVKTNHIWLTYFPRKLSWYVPDIHGTMDVKFDYHDFCGIRNEVKNCGYGWLLEQSGYDMNL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02265 498 Gene3D Ribonuclease Inhibitor 217 318 IPR032675 -
Trre8g02265 498 Gene3D Ribonuclease Inhibitor 31 208 IPR032675 -
Trre8g02265 498 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 307 IPR044974 GO:0006952
Trre8g02265 498 ProSiteProfiles Leucine-rich repeat profile. 251 272 IPR001611 GO:0005515
Trre8g02265 498 SUPERFAMILY L domain-like 36 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02265 Trre-Chr8 18138333 18140046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02265 34 289 WRKY Transcription Factor Family AT4G12020 33.579 1.37e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02265 - - mtr:11446628 421.009