Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02260 ATGGCTAGCAGCAGCAACTCCTCTGCCTTAGCTCTGATGACATTGCCAAAGAAGAGAAACAAATTCCAACAAGACTATGAGAAGGTGCAAAGATGGAGGAAAGCTCTCACACAAGTGGGAACAATCTCTGGTTGGGATGTGCGTCATAAGCCACAATCGGCGCAAATTAAAGAGATTGTTCAAAGAATAATGAATGTTTTGCATTGCAAACCTTCATGCAAAAAAATTGTCCAAGAAAATTCAAGCAAAGAGTCAAGAGAGTGGAAAAGGTTGTGGCGTAAGGAACAATTCGACGATGTTATTATATCGGGCCATATGGAAAAGAATGTTGAAGCCATAGTTTTGAATAAAGCAGTTTACAAAGAGATATGGAAGGATGCAGTGATGGTTGAATACTTTTCCAATCTTAGATTGCTCATCATCGGGTATGTGGGTGAATACGTGAATGAATCAGGAAGTCTCAATTGTCTTTCTAATGAATTAAGATATATTGAATGGTTGCATTATCCATTCATGAATTTGCCATCAAGTTTTCAGCCCATTCAACTTGTTGAGTTGATATTGCTTCGTAGTAGCATCAAAAAACTGTGGGAAGGCAAAAAGTATCTACCCAATTTGAGAAAGTTGTGGCTAGGCGAAAGCCGAAATCTAATAGAGATGCCAAATTTTGAAGAGTTCCCGAATCTTGAGCTGTTACATCTGGAAGGATGTGTAAGCCTTGTGAAGTTGGATCCTTCTATTGGACTTCTAAGAAAGATTTTTTACTTGAATTTGCAAGATTGCTCAAGTCTAATAAGCATACCCACCAACACCATACTTGGGATGAGCTCTCTTAAATACATAAACATGAGTGGTTGTTCCAAACTGTCGTACAATCAAAGGGCATCACATTCCCAGTCAACTTCTCCATCTTCAGATGTACCATATCGCTTTATCATTCCTCTTTACCCAGTCCCGTTGTATGAGGTAAAATGGTTATATTGTTTGAGTGAAATTGATATTAGCTTTTGTTGTCTACGCCAAGTCCCTGATGCAATTGGATGCCTACGTCAGCTACAAAGTTTAAATCTTGAAGGAAACTATTTTGTGTCACTACTCAGCCTTAATCTGAATGAGTTTTCCAAACTTGTATATTTAAACTTGGATCATTGCATGTTTTTGGAATCTTTGCCTCAGCTTCCTTTTCCTACTGCTATCAATTGGGATCCCTACGGAAATCGTTTGAATGTAGGATTGCACATTTTCAACTGTCCTAAATTGGGTGAGCGGGAATGTAGAATTGCATTTTCATGGATGAAACAATTCATTCAAGCAAACCCACAATTGCCTGGTGTGATTGATATTGTTATTCCTGGAAGTGAAATACCAATATTTTCTGCGAAACCTGGTAGTAACAATTCAATATATAAACGTAAGCAAAAAATTGAACTCTGGATTGCACTTCGTTTAACTGGTTTTTATTTAGATGGTACAGTGGCCGATTTGAATCGGCTACATCATCAAAATCAATTTATAGTAGCTGACAAAGAACAGGTAGTATCTTACAGAAGGCGAGAATTCATTAAGGTCAAAACAAATCACATTTGGCTAACCTATTTCCCCCGGAAGTTGTCCTGGTATTTTCCGGACTGTCATGGCACAATGCATGTTGCCTTTGATAACCATGATTTTGGTGGGTATAACGAGGTGAAGAATTGCGGATATGGCTGGCTACATAAACAGGGTCTACAAGAATTCAACTTAACAACGATGCATCCTGGAAACTCCTCAACCCTGGAGCACAAGTTTTTGGAAATAGAAGACAATCATTCATCTGATTAA 1821 0.3833 MASSSNSSALALMTLPKKRNKFQQDYEKVQRWRKALTQVGTISGWDVRHKPQSAQIKEIVQRIMNVLHCKPSCKKIVQENSSKESREWKRLWRKEQFDDVIISGHMEKNVEAIVLNKAVYKEIWKDAVMVEYFSNLRLLIIGYVGEYVNESGSLNCLSNELRYIEWLHYPFMNLPSSFQPIQLVELILLRSSIKKLWEGKKYLPNLRKLWLGESRNLIEMPNFEEFPNLELLHLEGCVSLVKLDPSIGLLRKIFYLNLQDCSSLISIPTNTILGMSSLKYINMSGCSKLSYNQRASHSQSTSPSSDVPYRFIIPLYPVPLYEVKWLYCLSEIDISFCCLRQVPDAIGCLRQLQSLNLEGNYFVSLLSLNLNEFSKLVYLNLDHCMFLESLPQLPFPTAINWDPYGNRLNVGLHIFNCPKLGERECRIAFSWMKQFIQANPQLPGVIDIVIPGSEIPIFSAKPGSNNSIYKRKQKIELWIALRLTGFYLDGTVADLNRLHHQNQFIVADKEQVVSYRRREFIKVKTNHIWLTYFPRKLSWYFPDCHGTMHVAFDNHDFGGYNEVKNCGYGWLHKQGLQEFNLTTMHPGNSSTLEHKFLEIEDNHSSD 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02260 606 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 290 IPR044974 GO:0006952
Trre8g02260 606 Gene3D Ribonuclease Inhibitor 304 455 IPR032675 -
Trre8g02260 606 SUPERFAMILY L domain-like 130 421 - -
Trre8g02260 606 Gene3D - 5 74 IPR035897 -
Trre8g02260 606 Gene3D Ribonuclease Inhibitor 75 303 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02260 Trre-Chr8 18118200 18121984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02260 74 391 WRKY Transcription Factor Family AT4G12020 31.420 6.41e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02260 - - mtr:11446628 389.037