Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02259 ATGGCGGCGCCGCCGATATTTTGGGGTTTTGGTGGTCTCGGTTTGGTGGTTGTACCGGATCTGCTTTCAGTTACGTATCTGCCCAATTTGAGACATTTGTGTCTAAGCGGTTCCTATAATCTAATAGAGATACCAAATTTTGAAGAGTTCCCGAATCTTGAGAAGTTAAATCTGGCAGCATGTTCAAGCCTTGTGAAGTTGGATCCTTCTATTGGACTTCTAAGAAAGCTTTTTTACTTGAATTTGAAAGATTGCAGAAGTCTAATAAGCATACCCAGCACCATATTTGGTCTCAGCTCTCTTGAATACTTATACATGAATGGCTGTGACAAAGTGTCGTTTAACAATCCAAAGGCATCACATTCCCAGTCATCTTCAAATGTACCATACCTCATTATCATTCCACATTTCCCACTCCCCAGTCAGGCAATTTGGATGTATTGTTTGAGTACCATTGATATTAGTTTTTGTGGTCTAAGCCAAGTCCCTGATGCAATTGGATGTCTACATCAGCTACAAAGATTAAATCTTGGAGGAAACAATTTTGTGTCACTACTCAGCTTGAATGAACTTTCCAAACTTGTATATTTAAACTTGGATCATTGCATGTTTTTGGAATCTTTGCCACAACTTCCTTCTCCTACTGCTATCAATTGGAATCTTGATACTAACAGTGGTCCTTTGGAAATAGGATTGCACATATTCAACTGTCCTAAATTGGGTGAGAGGGAATGTATATTTGCATTTTCATGGTTCAAACAATTCATTCAAGCAAACCCACAATTCTCTGATGCGATTGATATTGTGATTCCTGGAATTGAAATGCCAAGTTGGTTCAACAATCAAAGCGAGGGTGATAAAATACTGATAGACAACTTTCCCATTATACATGACATCAACAATGATATCGTTGGATTTGTATGTTGTTCAGTATTTTCTGTGGAACCTAGTACTCAACCCTTTGGTTTAGGTATATGCTTCCGATCTGATTGGGGAGCAGCTGGCCTCGTGATTAAACTTCATTTAACTGGTTTTTACTTAGATCATGCAGTGGACATGTCGTATCATGAAAATTTTCTCCCAGTATATTGCAAAGACCGAGATCTTATTAAGGTCAAAAGAAATCACATTTGGCTAACCTATTTACCCCGGAAGTTGTCCTGCAACTGCATTCACATTATAAATAAGCTTTTATCCTCATAG 1203 0.3832 MAAPPIFWGFGGLGLVVVPDLLSVTYLPNLRHLCLSGSYNLIEIPNFEEFPNLEKLNLAACSSLVKLDPSIGLLRKLFYLNLKDCRSLISIPSTIFGLSSLEYLYMNGCDKVSFNNPKASHSQSSSNVPYLIIIPHFPLPSQAIWMYCLSTIDISFCGLSQVPDAIGCLHQLQRLNLGGNNFVSLLSLNELSKLVYLNLDHCMFLESLPQLPSPTAINWNLDTNSGPLEIGLHIFNCPKLGERECIFAFSWFKQFIQANPQFSDAIDIVIPGIEMPSWFNNQSEGDKILIDNFPIIHDINNDIVGFVCCSVFSVEPSTQPFGLGICFRSDWGAAGLVIKLHLTGFYLDHAVDMSYHENFLPVYCKDRDLIKVKRNHIWLTYLPRKLSCNCIHIINKLLSS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02259 400 ProSiteProfiles Leucine-rich repeat profile. 171 192 IPR001611 GO:0005515
Trre8g02259 400 SUPERFAMILY L domain-like 20 255 - -
Trre8g02259 400 Gene3D Ribonuclease Inhibitor 11 129 IPR032675 -
Trre8g02259 400 Gene3D Ribonuclease Inhibitor 134 240 IPR032675 -
Trre8g02259 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 25 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02259 Trre-Chr8 18105778 18109134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02259 27 230 WRKY Transcription Factor Family AT4G12020 31.466 3.69e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02259 - - mtr:11446628 315.464