Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02246 ATGGCCACCTTCATTTTAAGGTCTAATAAACTAGTCCATGCATTGGGCTTGTTTTGTGTCATGCTAATGTTTCATAAGTGTGCTGCTTATGATTTCATAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAGGTGATTCCAATTCCAATCCTTTCAATCAATGGGCAGAAAAGAGCCGTTTTCAAATAGGAGACTCCCTAGTGTTCAATTACCAATCTGGCAAAGACTCAGTGCTATTTGTGAAGAGTGAAGACTATGCAAGTTGCAACACTGATTCGCCTAATGCAAAATTCTCTGATGGTCACACAGTCTTCAAACTGAACCAATCAGGACCTCATTTCTTCATCAGTGGAAACAAAGACAACTGTCTCAAAAATGAGAAGGTAACAATTATTGTTCTGTCCAACAGGAGCAACAGCAACAGTAATACCAACCAAACAAGCAATGCTTCTCCACCTTCACCACAATCATCATCATCACCACCTTCACCAGCACCTTCTAAACAAGAGGGTCAATCTCCACCTCCAGACACAAACCAAACACCACCTCCTACTACTGCTAGTGACCGCGATCATCCTCCTCGTAACGGTGCTGCTTCGGTCGTTGTCAGCCTAGCTGGGTCTATTGGAACATTCATGGCTTCAGTTCTAATTTTATCTAAATATGTATGA 669 0.4245 MATFILRSNKLVHALGLFCVMLMFHKCAAYDFIVGGQKGWSVPGDSNSNPFNQWAEKSRFQIGDSLVFNYQSGKDSVLFVKSEDYASCNTDSPNAKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKVTIIVLSNRSNSNSNTNQTSNASPPSPQSSSSPPSPAPSKQEGQSPPPDTNQTPPPTTASDRDHPPRNGAASVVVSLAGSIGTFMASVLILSKYV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02246 222 CDD OsENODL1_like 30 133 IPR041846 -
Trre8g02246 222 Gene3D - 30 146 IPR008972 -
Trre8g02246 222 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Trre8g02246 222 Pfam Plastocyanin-like domain 45 124 IPR003245 GO:0009055
Trre8g02246 222 MobiDBLite consensus disorder prediction 135 153 - -
Trre8g02246 222 MobiDBLite consensus disorder prediction 154 181 - -
Trre8g02246 222 FunFam Early nodulin-like protein 9 30 145 - -
Trre8g02246 222 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Trre8g02246 222 PANTHER BLUE COPPER PROTEIN 28 151 IPR039391 GO:0009055
Trre8g02246 222 MobiDBLite consensus disorder prediction 135 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02246 Trre-Chr8 18028213 18030781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02246 11 199 Phytocyanin Superfamily AT3G20570 48.148 3.51e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02246 - - gmx:100781182 286.96