Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02211 ATGAGTCATCTTAAATTGCCCGAGGTGAATTTTTCAGGAAACCTTAGCTCCCTTTCTAACGAGCTAAGATATGCGGAGTGGGATAGATATCCTTTCAAGTATTTGCCATCAAGTTTTGAGCCTTATCAACTTGTTGAATTGGTCTTGAAGCATAGCAGCATCAAATACCCGTGGAAAGACAAGAAGTATTTGCTCAGTTTGAGAACTTTGGATTTGAGTAACTCGAAAAATCTAAGAAAGATGCCAAATTTTGAAGGTGTCCTAAATCTTGAGCGGCTAAGTTTTGAAGGATGTGTGAAACTGATGCAGATCGATCCATCTATTAAGGTTCTAAGAAAGCTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGTATACATACCGAACTGTTGTGAATTCGACGATAACTCACACCAATAA 423 0.3712 MSHLKLPEVNFSGNLSSLSNELRYAEWDRYPFKYLPSSFEPYQLVELVLKHSSIKYPWKDKKYLLSLRTLDLSNSKNLRKMPNFEGVLNLERLSFEGCVKLMQIDPSIKVLRKLVFLNLKDCKNLVYIPNCCEFDDNSHQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02211 140 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 131 IPR044974 GO:0006952
Trre8g02211 140 SUPERFAMILY L domain-like 3 130 - -
Trre8g02211 140 Gene3D Ribonuclease Inhibitor 2 137 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02211 Trre-Chr8 17761733 17762330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02211 9 135 WRKY Transcription Factor Family AT4G12020 40.741 1.64e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02211 - - mtr:11443376 171.785