Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02208 ATGTTGGAAAATATGGAAAAGAAGGTTGAAGCCGTAAGGCTGGTTGTATATAAAGGTGAAACAAAAACGTTGATGCCCGATGAACTTGTTGAATTGATTTTGAAGTATAGCAACATCACACAACTATGGAAAGACAAGAAGTATTTGCCCAATCTTAGAAGATTGGACCTGAGTCACTCAAAAAATCTAAGAAAGATGCCAGATTTTAGAGATTTCCCAAATCTAGAGCAACTAAATTTTCAAGGATGTGTGAAACTAGTGGAGATGGATCCATCTATTGGGGTTCTAAGAAAGCTTGTTTCCTTGAATTTGAAAGATTGTAAAAAACTAGTAAGCATACCAAACAACATATTTGGTCTCAGCAGTCTTGAATGTCTAAATCTTTCAGGGTGTCCCAAATTGGTAAAGAATCCAAGCCATATGAATATAAGTGAAAAGTCGTCACATTCTCAATCAACAACGTCCCCCATCTTGAAATGGACAACACTTTGTTACCATTCCTTGTACCCCGACACACAAAAAGATTTAGCTAGTTGTGTGGTGCCTTCCTTGCTGAGCTTATCTAATTTGCTTAAACTTGATATTAGTTTTTATGGTCTAAGCCAACTACTCGATGAAATTGGATGTTTACGTTGGCTACAAGAATTAAATTTAGGAGGAAATAATTTTGTGACATTACCTAACCTGAACGAGCTTTCTAGACTTACATATTTAAACTTGGAGCATTGCAAGCTGTTGGAATCTTTGCCTCAACTTCCCTTTCCTACTTCTATCGAGTGGGACCTTCGAAAGAACAAATATAGTAACAAAAAAGGACTGCTCATTTTCAACTGCTCCGGATTGTGCAAGACAGAATGTTGCAATAGCATTACATTTTCATGGATTATACAATTTATTCAGGCAAACCAAGAACACAGTTTCATGCTTGATCGAATTGATTTTGTAGTTCCAGCAAAAAGTGAAATACCGAATTGGTTCAACAATCAGAGTGTGAGTGGTTCAATACCAATAGAACTATCTCCTTTTGTGCATGACAATGATGATAATATCATTGGCATTGCTTGTTGTGCAGTATTTTCCATTGCACCTATTGATCCAGCTATGACAATATATGCAAATGCAAACATATACGATATAGAGCTAAGCTTTTCTAACAAAATTACTTGCAATGGTTGGTGTGAGTTGTTTTCTTGTATCCCAGTAATTCTAGAAAGAGATCTTATTACGGTCAAATCAGATCACATGTGGCTAATCCATTTCACTCGGGATTCATTCTTTGATATTCTCAAGCATATAGACTTAACTCTCAACCATCTTGATGATTTCTGTATGAAAGTTGTTGATAGGAATTGCAAATTTTTGGCAATTGAAGATGCGGCACAACCACAATCTTCATCTGATTACATAATACCATAA 1416 0.3588 MLENMEKKVEAVRLVVYKGETKTLMPDELVELILKYSNITQLWKDKKYLPNLRRLDLSHSKNLRKMPDFRDFPNLEQLNFQGCVKLVEMDPSIGVLRKLVSLNLKDCKKLVSIPNNIFGLSSLECLNLSGCPKLVKNPSHMNISEKSSHSQSTTSPILKWTTLCYHSLYPDTQKDLASCVVPSLLSLSNLLKLDISFYGLSQLLDEIGCLRWLQELNLGGNNFVTLPNLNELSRLTYLNLEHCKLLESLPQLPFPTSIEWDLRKNKYSNKKGLLIFNCSGLCKTECCNSITFSWIIQFIQANQEHSFMLDRIDFVVPAKSEIPNWFNNQSVSGSIPIELSPFVHDNDDNIIGIACCAVFSIAPIDPAMTIYANANIYDIELSFSNKITCNGWCELFSCIPVILERDLITVKSDHMWLIHFTRDSFFDILKHIDLTLNHLDDFCMKVVDRNCKFLAIEDAAQPQSSSDYIIP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02208 471 Gene3D Ribonuclease Inhibitor 20 159 IPR032675 -
Trre8g02208 471 ProSiteProfiles Leucine-rich repeat profile. 212 233 IPR001611 GO:0005515
Trre8g02208 471 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 21 141 - -
Trre8g02208 471 Pfam C-JID domain 319 413 IPR045344 -
Trre8g02208 471 SUPERFAMILY L domain-like 26 283 - -
Trre8g02208 471 Gene3D Ribonuclease Inhibitor 171 275 IPR032675 -
Trre8g02208 471 Pfam Leucine Rich Repeat 29 47 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02208 Trre-Chr8 17749264 17753879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02208 22 138 WRKY Transcription Factor Family AT4G12020 44.000 3.64e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02208 - - mtr:11446628 370.933