Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02207 ATGTTAGAGAATGTGGAAAAGAAGGTTGAAGCTATATATTTTGTTGAAGACCTTGGTGCAAACGAAACAGAAAAATCGATCACGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCATATTCAAGGAAATGGTTTTTTCAGGAAACCTCAGCTGCCTCTCTAATGAGTTAAGATATGTGGAGTGGGCTAGATATCCTTTCAAGTATTTGCCAGCATGTTTTGAGCCAAATAAACTTGTTGAATTGACCTTGAGGCATAGCAGCATCAAAAAACTATGGAAAGATAAGAAGTATTTGCCCAATTTGAGAAGTTTGGATCTAAGCCACTCGAAAAATCTAAGAAAGATGCCGGATTTTGGAGATATCCCAAATCTTGAGGAGCTAAATCTTAAAGGTTGTATTGAGATTGTGCAAATGGATCCATCAATCGGGGTTCTAAAAAAGCTTTATTTCTTGAAATTGAAAGATTGTAAAAATCTAGTAAGCATACCAAACAACATATTTGGTCTCACCTCTCTCAAATATCTAGATCTTTCGGGATGTCCCAAAGTGAGTAAGAATCCAATTCAAAGGCAATTGAAGAACCTCGATTCAAGTGAAAGTTCATCAGATTCCCGATTAACAACTTCCTCCTTGAAATGGACCACAATTGGTTTACGTTCCTTTTATGATTACCAAAAAGTTTTAGCAAGCTCTTTGTTGCCTTCTTTTCTTAGCTTATATTGTTTGAGTGAAGTTGATATCAGCTTCTGTGGTCTAAGTCAACTCCCTGATGCAATTGGAAGTCTAAGTCAGCTAGAAAGATTAAATATTGGAGGGAACAATTTTGTGACACTACCTAGCCTGATGGAGCTTTCCAACCTTGAATACTTAAACTTAGAGCATTGCAAGCTTTTGGAATCTTTGCCTCATTTTCCTTATCCTACATTTTTCGACCATATGACAAAATATAAGACTACTTTCAAGCATATGAAAAAATATTATAAGAGGAAAATAGGATTGGTCATTTTCAATTGTCCTAAATTGGGTGAGACTGAACGCTACAGTGAAATGGCATTTTCATGGATGACACGATTCATTCAGGCAAGACAACAATCCTCCTCTGCCTCTTTTGATCATGACATATTCATTGAAATTGTTATTCCCGGGAGTGAAATACCAATATGGTTCAATAATCAGAGCGAGGGTGATTCAATAAGAATCGACCTATCTACCATTATGGATGACAATCACAATAATTGCATTGACATTGCTTGTTGTGTAGTATTTTCCATCGCACCATCTGATCTGGCTACGCCAACATTTCCATGGGGAGACAGACTAAGGTTGCAATTTTATAATAGTAGGATTGACGATTTTAGTTGGAATGACATCATTCCAGTAATTTTAGAAAGTGATCTTATTATGGTCAAATCATATCATATGTGCCTAATGTATATCCCTATGGAATCATTCTTTGATATTATGAAGTGGATAGACAGTACTCTCACACATCTTGATTATTTCAAAATGCAAGCTGGCATTGACGAGCAGGACAAAGATCTGGATTTTGAGGTGCAGAATTGCGGGTATCGTTTGGTATATGAACATGATCTACCAGAGTTCAACTTAACAATGATGCATCCAGGAAATCCGTTAGCTCAGAAGCGCAAGTTTTTGGCAATTGAAGATGAGGAGGCACAACTACCGTCATTTAGGGGTGGCTATATGTGTCGATTCTTTAGATGCTAA 1737 0.3685 MLENVEKKVEAIYFVEDLGANETEKSITGETLSKMSHLRLLIFKEMVFSGNLSCLSNELRYVEWARYPFKYLPACFEPNKLVELTLRHSSIKKLWKDKKYLPNLRSLDLSHSKNLRKMPDFGDIPNLEELNLKGCIEIVQMDPSIGVLKKLYFLKLKDCKNLVSIPNNIFGLTSLKYLDLSGCPKVSKNPIQRQLKNLDSSESSSDSRLTTSSLKWTTIGLRSFYDYQKVLASSLLPSFLSLYCLSEVDISFCGLSQLPDAIGSLSQLERLNIGGNNFVTLPSLMELSNLEYLNLEHCKLLESLPHFPYPTFFDHMTKYKTTFKHMKKYYKRKIGLVIFNCPKLGETERYSEMAFSWMTRFIQARQQSSSASFDHDIFIEIVIPGSEIPIWFNNQSEGDSIRIDLSTIMDDNHNNCIDIACCVVFSIAPSDLATPTFPWGDRLRLQFYNSRIDDFSWNDIIPVILESDLIMVKSYHMCLMYIPMESFFDIMKWIDSTLTHLDYFKMQAGIDEQDKDLDFEVQNCGYRLVYEHDLPEFNLTMMHPGNPLAQKRKFLAIEDEEAQLPSFRGGYMCRFFRC 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02207 578 Gene3D Ribonuclease Inhibitor 16 208 IPR032675 -
Trre8g02207 578 Gene3D Ribonuclease Inhibitor 228 325 IPR032675 -
Trre8g02207 578 SMART LRR_CC_2 265 290 IPR006553 -
Trre8g02207 578 SMART LRR_CC_2 172 197 IPR006553 -
Trre8g02207 578 SUPERFAMILY L domain-like 25 308 - -
Trre8g02207 578 ProSiteProfiles Leucine-rich repeat profile. 267 288 IPR001611 GO:0005515
Trre8g02207 578 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 35 201 - -
Trre8g02207 578 Pfam Leucine Rich Repeat 80 99 IPR011713 -
Trre8g02207 578 Pfam C-JID domain 383 534 IPR045344 -
Trre8g02207 578 Pfam Leucine rich repeat 245 300 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02207 Trre-Chr8 17741581 17743559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02207 34 305 WRKY Transcription Factor Family AT4G12020 31.379 8.94e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02207 - - tpra:123883787 671.774