Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02206 ATGGTGCTTAGATGGAGGGAAGCTCTTACACAAACGGGGAATATCTCTGGCTGGGATCTACGTGATAAGCCTCAAAATTCAGAGATTGAAAAGATTGTTCAAGAGATAATGAATATATTGAGTCGCAAAGTTTCGTGTCAGCTTTCAAAAGAATTAGTTGGAATGGATTCTCCTATAGAAAAAGTGACAAATCTATTGCTTTTGGACTCGGTTAATGATGTTCGGGTTGTAGGAATTTGTGGGATGAGTGGAATAGGGAAGACAGCTCTTGCTACTGCTTTATGTGGTCAAATCTCTCAACAATTTGATGCACTTTGTTTTATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAGAAAATCCTACACCAAACTCTTGGTGGCGAACACTTTCAGATATCCAATCTCTATGACACGACTAATTTGTTACGGAGTAGGTTACGTCGCCTACGAGCACTTATAATTCTTGATAATGTCGATAAAATTGAACAACTCGATAAGTTAGCTATGAGTCGTGAATGGTTAGGTGCAGGAAGTAGAATCATTATAATTTGTAGAGATGAGCATATCTTGAAAGAGTATGGAGTGGATATAGTTTACAAAGTTCCTTTCTTAAATAAGACTTACTCTCTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGATCATATTTTGAGTAGTTATGAAGGTTTGGTTAACGGCATACTACACTATGCTGATGGCCTGCCACTAGCAATTGAAGTATTGGGTTCGTTTTTGTTTGGTCGAGATATATTTGAGTGGAAAAGTGCATTGTCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTGAGATTAAGTTTTGATGGTCTAGAGGAAATGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATTGGAGCAACAAAGATTATGTCCAAACAGTCCTAAATTGTTGTGGATTTCATGCTGATATTGGTTTAGGAGTTCTAATTGATAAATCGCTTCTAAGCATTTCGAATGATCAAATTATAATGCAAAATTTGTTAGAAGAGTTGGGCAAAAAAATTGTCCAAGATATTACAAGCAAAGAGTCAAGAAAGCATAGTCGGGTGTGGCTCCACGAACAACTCCAAAATGTTATGTTAGAGAATGTGGAAAAGAAGGTTGAAGCTATATATTTTGTTGAAGACCTTGGTGCAAACGAAACAGAAAAATCGATCACGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCATATTCAAGGAAATGGTTTTTTCAGGAAACCTCAGCTGCCTCTCTAATGAGTTAAGATATGTGGAGTGGGCTAGATATCCTTTCAAGTATTTGCCAGCATGTTTTGAGCCAAATAAACTTGTTGAATTGACCTTGAGGCATAGCAGCATCAAAAAACTATGGAAAGATAAGAAGTATTTGCCCAATTTGAGAAGTTTGGATCTAAGCCACTCGAAAAATCTAAGAAAGATGCCGGATTTTGGAGATATCCCAAATCTTGAGGAGCTAAATCTTAAAGGTTGTATTGAGATTGTGCAAATGGATCCATCAATCGGGGTTCTAAAAAAGCTTTATTTCTTGAAATTGAAAGATTGTAAAAATCTAGTAAGCATACCAAACAACATATTTGGTCTCACCTCTCTCAAATATCTAGATCTTTCGGGATGTCCCAAAGTGAGTAAGAATCCAATTCAAAGGCAATTGAAGAACCTCGATTCAAGTGAAAGTTCATCAGATTCCCGATTAACAACTTCCTCCTTGAAATGGACCACAATTGGTTTACGTTCCTTTTATGATTACCAAAAAGTTTTAGCAAGCTCTTTGTTGCCTTCTTTTCTTAGCTTATATTGTTTGAGTGAAGTTGATATCAGCTTCTGTGGTCTAAGTCAACTCCCTGATGCAATTGGAAGTCTAAGTCAGCTAGAAAGATTAAATATTGGAGGGAACAATTTTGTGACACTACCTAGCCTGATGGAGCTTTCCAACCTTGAATACTTAAACTTAGAGCATTGCAAGCTTTTGGAATCTTTGCCTCATTTTCCTTATCCTACATTTTTCGACCATATGACAAAATATAAGACTACTTTCAAGCATATGAAAAAATATTATAAGAGGAAAATAGGATTGGTCATTTTCAATTGTCCTAAATTGGGTGAGACTGAACGCTACAGTGAAATGGCATTTTCATGGATGACACGATTCATTCAGGCAAGACAACAATCCTCCTCTGCCTCTTTTGATCATGACATATTCATTGAAATTGTTATTCCCGGGAGTGAAATACCAATATGGTTCAATAATCAGAGCGAGGGTGATTCAATAAGAATCGACCTATCTACCATTATGGATGACAATCACAATAATTGCATTGACATTGCTTGTTGTGTAGTATTTTCCATCGCACCATCTGATCTGGCTACGCCAACATTTCCATGGGGAGACAGACTAAGGTTGCAATTTTATAATAGTAGGATTGACGATTTTAGTTGGAATGACATCATTCCAGTAATTTTAGAAAGTGATCTTATTATGGTCAAATCATATCATATGTGCCTAATGTATATCCCTATGGAATCATTCTTTGATATTATGAAGTGGATAGACAGTACTCTCACACATCTTGATTATTTCAAAATGCAAGCTGGCATTGACGAGCAGGACAAAGATCTGGATTTTGAGGTGCAGAATTGCGGGTATCGTTTGGTATATGAACATGATCTACCAGAGTTCAACTTAACAATGATGCATCCAGGAAATCCGTTAGCTCAGAAGCGCAAGTTTTTGGCAATTGAAGATGAGGAGGCACAACTACCGTCATTTAGGGGTGGCTATATGTGTCGATTCTTTAGATGCTAA 2889 0.3648 MVLRWREALTQTGNISGWDLRDKPQNSEIEKIVQEIMNILSRKVSCQLSKELVGMDSPIEKVTNLLLLDSVNDVRVVGICGMSGIGKTALATALCGQISQQFDALCFIDDLSKIYRHDGPIGAQKKILHQTLGGEHFQISNLYDTTNLLRSRLRRLRALIILDNVDKIEQLDKLAMSREWLGAGSRIIIICRDEHILKEYGVDIVYKVPFLNKTYSLQLFCRKAFKLDHILSSYEGLVNGILHYADGLPLAIEVLGSFLFGRDIFEWKSALSRLRESPNKDVMDVLRLSFDGLEEMEKEIFLDIACFFNWSNKDYVQTVLNCCGFHADIGLGVLIDKSLLSISNDQIIMQNLLEELGKKIVQDITSKESRKHSRVWLHEQLQNVMLENVEKKVEAIYFVEDLGANETEKSITGETLSKMSHLRLLIFKEMVFSGNLSCLSNELRYVEWARYPFKYLPACFEPNKLVELTLRHSSIKKLWKDKKYLPNLRSLDLSHSKNLRKMPDFGDIPNLEELNLKGCIEIVQMDPSIGVLKKLYFLKLKDCKNLVSIPNNIFGLTSLKYLDLSGCPKVSKNPIQRQLKNLDSSESSSDSRLTTSSLKWTTIGLRSFYDYQKVLASSLLPSFLSLYCLSEVDISFCGLSQLPDAIGSLSQLERLNIGGNNFVTLPSLMELSNLEYLNLEHCKLLESLPHFPYPTFFDHMTKYKTTFKHMKKYYKRKIGLVIFNCPKLGETERYSEMAFSWMTRFIQARQQSSSASFDHDIFIEIVIPGSEIPIWFNNQSEGDSIRIDLSTIMDDNHNNCIDIACCVVFSIAPSDLATPTFPWGDRLRLQFYNSRIDDFSWNDIIPVILESDLIMVKSYHMCLMYIPMESFFDIMKWIDSTLTHLDYFKMQAGIDEQDKDLDFEVQNCGYRLVYEHDLPEFNLTMMHPGNPLAQKRKFLAIEDEEAQLPSFRGGYMCRFFRC 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02206 962 Gene3D - 29 204 IPR027417 -
Trre8g02206 962 Pfam NB-ARC domain 57 280 IPR002182 GO:0043531
Trre8g02206 962 SUPERFAMILY L domain-like 409 692 - -
Trre8g02206 962 Gene3D - 210 294 IPR042197 -
Trre8g02206 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 304 IPR027417 -
Trre8g02206 962 PRINTS Disease resistance protein signature 245 259 - -
Trre8g02206 962 PRINTS Disease resistance protein signature 76 91 - -
Trre8g02206 962 PRINTS Disease resistance protein signature 152 166 - -
Trre8g02206 962 PRINTS Disease resistance protein signature 483 499 - -
Trre8g02206 962 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 703 IPR044974 GO:0006952
Trre8g02206 962 SUPERFAMILY "Winged helix" DNA-binding domain 281 383 IPR036390 -
Trre8g02206 962 Pfam C-JID domain 767 918 IPR045344 -
Trre8g02206 962 Gene3D Ribonuclease Inhibitor 615 711 IPR032675 -
Trre8g02206 962 SMART AAA_5 73 211 IPR003593 GO:0016887
Trre8g02206 962 Gene3D Ribonuclease Inhibitor 350 592 IPR032675 -
Trre8g02206 962 SMART LRR_CC_2 556 581 IPR006553 -
Trre8g02206 962 SMART LRR_CC_2 649 674 IPR006553 -
Trre8g02206 962 Pfam Leucine Rich Repeat 464 483 IPR011713 -
Trre8g02206 962 Pfam Leucine rich repeat 629 684 IPR001611 GO:0005515
Trre8g02206 962 ProSiteProfiles Leucine-rich repeat profile. 651 672 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02206 Trre-Chr8 17741581 17745581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02206 59 698 WRKY Transcription Factor Family AT5G45050 32.075 3.12e-77 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02206 - - tpra:123883787 1240.71