Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02205 ATGAGTCATCTTAAATTGCTCGAGGTGAATTTTTCAGGAAACCTTAGCTCCCTTTCTAACGAGCTAAGATATGTGGAGTGGGATAGATATCCTTTCAAGTATTTGCCATCAAGTTTTGAGCCTTATCAACTTGTTGAATTGATCTTGAAGCATAGCAGCATCAAACACCTGTGGAAAGACAAGAAGTATTTGCTCAATTTGAGAACTTTGGATTTGAGTTACTCGAAAAATCTAAGAAAGATGCCAAATTTTGAAGGGGTGCGAAATCTTGAGCAGCTAAGTTTTGAAGGATGTGTGAAACTGGTGCAGATTGATCCATCTATTCAGGTTCTGAGAAAGCTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGTATGCATACCGAACGACATTTGTCTAATCTCTCTTGAATGTCTAAATCTTTCGGGATGTCCGAAATTGTTTAAGAATCCAAGACATTTGCGTAAAAGTGAATATGCATCACATTCCGAATCAACAACATCATCCTTCTTAAAATGGACCAAGTTTCGTTTCCATTCCTTGTATCACAGTGTACACAAAGCTTTACCTAATTGTTTATTGAGTTCCTTGCTTAGATTATCTTGTTTGCATAAACTTGATATTAGTTTTTGTGGTCTAAGTCAACTCCCTGATGCAATTGGATGTTTAAGTTGGCTCGAAGAATTAAACTTAGGGGGAAACAATTTTGTTACATTACCTAGCATGTGTGAGCTTTCCAAACTTGTATATTTAAACTTGGAGCATTGCAAGATGTTAGAATCTTTGCCTCAACTTCCTTTTCCTATGACTATCAATCACGACCTTCGCATCAGTGATAGTGATATGACCGATTTTTGGCGGAGATTAGGATTGATCATTTTCAATTGTCCTAAATTAGGTGAGAGTGAAAGTTGCAGTAGCATGGCATTTTCATGGATGACACAATTGATTCAGGCAAGACAACAATCCTCCACTGCCTCTTTTCATGAGATCATTGATATCGTTATTCCTGGAAGTGAAATACCATTTTGGTTCGACAATAAGTGCGATGGTGATTCAATAAGAATGGACCTATCTCCCATTATGCATGACGATGGCAACTATTTCGGTGGCTTTGTTTGTTGTGAAGCATTTTCCGTTGCGCCTGATCCAACTAGAATAACAAATGCACAGAGACCTGAAATAGAGCTATATATTTCGAATAGTAAAACTCGCTTTAAGTGGCATGTCAGCATTCCAGTAATGCTTGAAAGATATCTTATTGAGGTAAAATCAAATCACATGTGCCTAATCTATTTCCCTCTAGAATCATTCTTTTATATTCTGAAGTGGATAGACGTAACTCTCAGCCATCTCGATGATTTCAATATGAAAGTTAGAGTTAAGAACAGCGAAGGTATGCATCTGCAGGTTCAGAATTGTGGGTATCATTGGGTATATAAACAAGATCATGCAACACTGCAGAAACTTCTTAGCTCGTAA 1485 0.3704 MSHLKLLEVNFSGNLSSLSNELRYVEWDRYPFKYLPSSFEPYQLVELILKHSSIKHLWKDKKYLLNLRTLDLSYSKNLRKMPNFEGVRNLEQLSFEGCVKLVQIDPSIQVLRKLVFLNLKDCKNLVCIPNDICLISLECLNLSGCPKLFKNPRHLRKSEYASHSESTTSSFLKWTKFRFHSLYHSVHKALPNCLLSSLLRLSCLHKLDISFCGLSQLPDAIGCLSWLEELNLGGNNFVTLPSMCELSKLVYLNLEHCKMLESLPQLPFPMTINHDLRISDSDMTDFWRRLGLIIFNCPKLGESESCSSMAFSWMTQLIQARQQSSTASFHEIIDIVIPGSEIPFWFDNKCDGDSIRMDLSPIMHDDGNYFGGFVCCEAFSVAPDPTRITNAQRPEIELYISNSKTRFKWHVSIPVMLERYLIEVKSNHMCLIYFPLESFFYILKWIDVTLSHLDDFNMKVRVKNSEGMHLQVQNCGYHWVYKQDHATLQKLLSS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02205 494 Pfam C-JID domain 337 484 IPR045344 -
Trre8g02205 494 SUPERFAMILY L domain-like 4 459 - -
Trre8g02205 494 Gene3D Ribonuclease Inhibitor 165 327 IPR032675 -
Trre8g02205 494 Gene3D Ribonuclease Inhibitor 1 164 IPR032675 -
Trre8g02205 494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 8 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02205 Trre-Chr8 17739001 17740584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02205 9 230 WRKY Transcription Factor Family AT4G12020 35.686 2.21e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02205 - - tpra:123883787 457.603