Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02196 ATGGGGTCGGGATCAGGGAGGGAGTTTAAAGAACGGAGGCGGATGCCGAGGGTTATGAGTGTCCCGGGGATTGTGTCAGAGCTGGATGATGATCAGGCAGTAAGTGTTTCTTCTGATAATCCGTCAACTATTTCTACTGATAGAATTATCATTGTAGCAAATCAGCTACCTTTGAAAGCAAAGAGAAGAGATGACAACAAAGGGTGGAGTTTTAGTTGGAATGAGGATTCCTTGCTCTTACAGCTTAAGGATGGATTTCCGGAAGAGATGGAGGTTCTTTATGTTGGGTCTCTACGCATTGATGTTGATCCCGCTGAACAAGACGATGTATCACAATATTTATTGGATAAATTCAAATGTGTTCCTACTTTTCTACCTCCTGATACTTTATTGAAATTTTATGATGGCTTTTGCAAAAGACAATTATGGCCACTTTTTCATTACAAGTTACCGTTTTCGACTGATAAAAGCCACCGTTTTGATCGCACATTGTGGGAAGCTTATGTTCTGGCAAACAAGCTTTTCTTTCAAAAGGTAGTAGAAATAATAAACCCGGAGGATGATTATATTTGGGTTCATGATTACCATTTAATGGTGCTGCCAACTTTTCTTAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCGTCAGAGATATATCGGACTCTTCCTGTCAGGGAAGAGATAATGAAAGCTCTACTCAATTCTGATATCATTGGATTCCATACTTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTAGAGTATCAGTCAAAGAGGGGCTATCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATCATGCCTGTTGGGATTCAGCTGGGTCGGATTGAATCTGTTATGAGAATGGCAGATGAAGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATTTTGCTTGGCATTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAAACAACACCCGAAATGGCAAGGAAGGGCTGTTTTAGTCCAGATAGTTAATCCTGCTAGAGGTAAAGGGGTACATGTAGATGAAGTACATACTGAAATAGAAGAAAGCTGCAGAAGGATCAACAGAGTGTATGGACGGCCTGGTTATGAACCTATTGTTTTTATCGATAGGTCGGTTCCAATTACTGAAAAAGTTGCCTTTTACAGCCTCGCTGAGTGTGTCATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATAGTTTGTAGACAGGGATTATCTGGTTCCGAATCAAGTTCCAATGTGAATGACCCAAAGAAGAGTATGCTTGTCATATCAGAATTTATTGGGTGTTCTCCATCACTAAGTGGGGCGATCCGTATCAATCCATGGAATGTTGAATCAACTGCAGAAGCAATGAATGAAGCCATTTCAATGGGTGATGGAGAGAAGCAGCTGCGGCACGAAAAGCATTATCGGTATGTCAGCACTCATGACGTGGGTTACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGTTTCAGAGTTGTGGCACTTGACCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAAAACTCCATTAATAAAAGTCCAAGCAACGAGGTCATCTCTATTTTGGAAACTCTCTCTGAAGACCCCAAAAATACAGTTTTCATTGTTAGTGGACGGGGTAGGGATAGCTTAAGTGAGTGGTTTACTCCCTGCAAAAAACTTGGAATTGCCGCAGAACATGGATACTTCTTGAGGTGGTCCAAGGATGGTGAATGGGAAATTTGTGGTAACTGCTCCGATTTTGGATGGATGCAGATCGCTGAACCTGTAATGAATTTATATACAGAGGCAACTGATGGTTCCAGCATCGAACGAAAGGAAAGTGCTTTGGTCTGGCAATACAGGGATGCAGACCTTGGTTTTGGATCTTCTCAAGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTTCTGCGAAGAGTGGCCAGTTTATCGTTGAAGTGAAGCCTCAGGATGTGAGCAAAGGCTTAGTTGCAGAGAAGATATTTTCGTCATTGACCGAGAGTGGCAAACAGGCGGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATATCAAGAAATATTCTTTCTTCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAGCCAAGCAAAGCTAAGTATTATCTGGATGATACGTATGAAGTAATAAACATGCTAGAATCTTTGGCTGAAGAATCAGTTTCTTCACCCTGCATAGAAGAATCTAGGGATTCCTCTTAG 2529 0.414 MGSGSGREFKERRRMPRVMSVPGIVSELDDDQAVSVSSDNPSTISTDRIIIVANQLPLKAKRRDDNKGWSFSWNEDSLLLQLKDGFPEEMEVLYVGSLRIDVDPAEQDDVSQYLLDKFKCVPTFLPPDTLLKFYDGFCKRQLWPLFHYKLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEIMKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIQLGRIESVMRMADEECKVRELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGKGVHVDEVHTEIEESCRRINRVYGRPGYEPIVFIDRSVPITEKVAFYSLAECVIVTAVRDGMNLTPYEYIVCRQGLSGSESSSNVNDPKKSMLVISEFIGCSPSLSGAIRINPWNVESTAEAMNEAISMGDGEKQLRHEKHYRYVSTHDVGYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSNEVISILETLSEDPKNTVFIVSGRGRDSLSEWFTPCKKLGIAAEHGYFLRWSKDGEWEICGNCSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVSAKSGQFIVEVKPQDVSKGLVAEKIFSSLTESGKQADFVLCVGDDRSDEDMFEIVSSAISRNILSSNASVFACTVGQKPSKAKYYLDDTYEVINMLESLAEESVSSPCIEESRDSS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02196 842 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 16 827 IPR001830 GO:0003824|GO:0005992
Trre8g02196 842 Gene3D Glycogen Phosphorylase B; 41 301 - -
Trre8g02196 842 Gene3D Glycogen Phosphorylase B; 302 515 - -
Trre8g02196 842 NCBIfam trehalose-phosphatase 575 826 IPR003337 GO:0003824|GO:0005992
Trre8g02196 842 CDD HAD_TPP 579 820 - -
Trre8g02196 842 SUPERFAMILY HAD-like 578 826 IPR036412 -
Trre8g02196 842 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 707 838 - -
Trre8g02196 842 FunFam Alpha,alpha-trehalose-phosphate synthase 302 515 - -
Trre8g02196 842 NCBIfam HAD-IIB family hydrolase 580 784 IPR006379 -
Trre8g02196 842 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 41 300 - -
Trre8g02196 842 Pfam Glycosyltransferase family 20 48 531 IPR001830 GO:0003824|GO:0005992
Trre8g02196 842 Pfam Trehalose-phosphatase 581 814 IPR003337 GO:0003824|GO:0005992
Trre8g02196 842 CDD GT20_TPS 48 531 IPR001830 GO:0003824|GO:0005992
Trre8g02196 842 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 577 694 - -
Trre8g02196 842 Gene3D - 707 835 IPR023214 -
Trre8g02196 842 Gene3D - 577 676 IPR023214 -
Trre8g02196 842 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 47 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02196 Trre-Chr8 17670453 17674584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02196 10 832 Trehalose Biosynthesis Gene Families AT1G06410 77.157 0.0 1337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02196 K16055 - gmx:100800847 1554.27