Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02195 ATGATGTCCAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCAATGGGGTCGGGATCAGGGAGGGAGTTTAAAGAACGGAGGCGGATGCCGAGGGTTATGAGTGTCCCGGGGATTGTGTCAGAGCTGGATGATGATCAGGCAGTAAGTGTTTCTTCTGATAATCCGTCAACTATTTCTACTGATAGAATTATCATTGTAGCAAATCAGCTACCTTTGAAAGCAAAGAGAAGAGATGACAACAAAGGGTGGAGTTTTAGTTGGAATGAGGATTCCTTGCTCTTACAGCTTAAGGATGGATTTCCGGAAGAGATGGAGGTTCTTTATGTTGGGTCTCTACGCATTGATGTTGATCCCGCTGAACAAGACGATGTATCACAATATTTATTGGATAAATTCAAATGTGTTCCTACTTTTCTACCTCCTGATACTTTATTGAAATTTTATGATGGCTTTTGCAAAAGACAATTATGGCCACTTTTTCATTACAAGTTACCGTTTTCGACTGATAAAAGCCACCGTTTTGATCGCACATTGTGGGAAGCTTATGTTCTGGCAAACAAGCTTTTCTTTCAAAAGGTAGTAGAAATAATAAACCCGGAGGATGATTATATTTGGGTTCATGATTACCATTTAATGGTGCTGCCAACTTTTCTTAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCGTCAGAGATATATCGGACTCTTCCTGTCAGGGAAGAGATAATGAAAGCTCTACTCAATTCTGATATCATTGGATTCCATACTTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTAGAGTATCAGTCAAAGAGGGGCTATCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATCATGCCTGTTGGGATTCAGCTGGGTCGGATTGAATCTGTTATGAGAATGGCAGATGAAGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATTTTGCTTGGCATTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAAACAACACCCGAAATGGCAAGGAAGGGCTGTTTTAGTCCAGATAGTTAATCCTGCTAGAGGTAAAGGGGTACATGTAGATGAAGTACATACTGAAATAGAAGAAAGCTGCAGAAGGATCAACAGAGTGTATGGACGGCCTGGTTATGAACCTATTGTTTTTATCGATAGGTCGGTTCCAATTACTGAAAAAGTTGCCTTTTACAGCCTCGCTGAGTGTGTCATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATAGTTTGTAGACAGGGATTATCTGGTTCCGAATCAAGTTCCAATGTGAATGACCCAAAGAAGAGTATGCTTGTCATATCAGAATTTATTGGGTGTTCTCCATCACTAAGTGGGGCGATCCGTATCAATCCATGGAATGTTGAATCAACTGCAGAAGCAATGAATGAAGCCATTTCAATGGGTGATGGAGAGAAGCAGCTGCGGCACGAAAAGCATTATCGGTATGTCAGCACTCATGACGTGGGTTACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGTTTCAGAGTTGTGGCACTTGACCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAAAACTCCATTAATAAAAGTCCAAGCAACGAGGTCATCTCTATTTTGGAAACTCTCTCTGAAGACCCCAAAAATACAGTTTTCATTGTTAGTGGACGGGGTAGGGATAGCTTAAGTGAGTGGTTTACTCCCTGCAAAAAACTTGGAATTGCCGCAGAACATGGATACTTCTTGAGGTGGTCCAAGGATGGTGAATGGGAAATTTGTGGTAACTGCTCCGATTTTGGATGGATGCAGATCGCTGAACCTGTAATGAATTTATATACAGAGGCAACTGATGGTTCCAGCATCGAACGAAAGGAAAGTGCTTTGGTCTGGCAATACAGGGATGCAGACCTTGGTTTTGGATCTTCTCAAGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTTCTGCGAAGAGTGGCCAGTTTATCGTTGAAGTGAAGCCTCAGGATGTGAGCAAAGGCTTAGTTGCAGAGAAGATATTTTCGTCATTGACCGAGAGTGGCAAACAGGCGGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATATCAAGAAATATTCTTTCTTCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAGCCAAGCAAAGCTAAGTATTATCTGGATGATACGTATGAAGTAATAAACATGCTAGAATCTTTGGCTGAAGAATCAGTTTCTTCACCCTGCATAGAAGAATCTAGGGATTCCTCTTAG 2586 0.4142 MMSRSYTNLLDLASGNFPAMGSGSGREFKERRRMPRVMSVPGIVSELDDDQAVSVSSDNPSTISTDRIIIVANQLPLKAKRRDDNKGWSFSWNEDSLLLQLKDGFPEEMEVLYVGSLRIDVDPAEQDDVSQYLLDKFKCVPTFLPPDTLLKFYDGFCKRQLWPLFHYKLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEIMKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIQLGRIESVMRMADEECKVRELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGKGVHVDEVHTEIEESCRRINRVYGRPGYEPIVFIDRSVPITEKVAFYSLAECVIVTAVRDGMNLTPYEYIVCRQGLSGSESSSNVNDPKKSMLVISEFIGCSPSLSGAIRINPWNVESTAEAMNEAISMGDGEKQLRHEKHYRYVSTHDVGYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSNEVISILETLSEDPKNTVFIVSGRGRDSLSEWFTPCKKLGIAAEHGYFLRWSKDGEWEICGNCSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVSAKSGQFIVEVKPQDVSKGLVAEKIFSSLTESGKQADFVLCVGDDRSDEDMFEIVSSAISRNILSSNASVFACTVGQKPSKAKYYLDDTYEVINMLESLAEESVSSPCIEESRDSS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02195 861 NCBIfam HAD-IIB family hydrolase 599 803 IPR006379 -
Trre8g02195 861 Gene3D Glycogen Phosphorylase B; 60 320 - -
Trre8g02195 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 713 - -
Trre8g02195 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 60 319 - -
Trre8g02195 861 Gene3D Glycogen Phosphorylase B; 321 534 - -
Trre8g02195 861 SUPERFAMILY HAD-like 597 845 IPR036412 -
Trre8g02195 861 Gene3D - 596 695 IPR023214 -
Trre8g02195 861 Gene3D - 726 854 IPR023214 -
Trre8g02195 861 FunFam Alpha,alpha-trehalose-phosphate synthase 321 534 - -
Trre8g02195 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 726 857 - -
Trre8g02195 861 CDD GT20_TPS 67 550 IPR001830 GO:0003824|GO:0005992
Trre8g02195 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 846 IPR001830 GO:0003824|GO:0005992
Trre8g02195 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 66 554 - -
Trre8g02195 861 CDD HAD_TPP 598 839 - -
Trre8g02195 861 Pfam Glycosyltransferase family 20 67 550 IPR001830 GO:0003824|GO:0005992
Trre8g02195 861 NCBIfam trehalose-phosphatase 594 845 IPR003337 GO:0003824|GO:0005992
Trre8g02195 861 Pfam Trehalose-phosphatase 600 833 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02195 Trre-Chr8 17670453 17674641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02195 1 851 Trehalose Biosynthesis Gene Families AT1G06410 76.851 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02195 K16055 - gmx:100800847 1590.09