Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02183 ATGGACTCCATCGGCGGAGCTCCGTCTCCCGTTAACTTTGCTCCGCCGCGTCCTCCGTCGTCATCGCCGTTTCCCGGTCGGGAAGACTGTTGGAGCGAAGACGCAACTTCCACCCTCGTCGACGCCTGGGGAGAACGCTATCTCGACCTCAACCGTGGTAACCTCCGCCAGAAGCACTGGCAAGAGGTTGCCGACGCTGTCAACGACGTCCACGCCGCCGGCAATAACAAGAAAGCGCGCCGGACCGACGTTCAGTGCAAAAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAAGCTAGGGTTTCCGAATCCGACGGCGGTTACCAGAGTCCCTGGCCATTCTTCTCTCGTCTCGACATCCTCATCGGCGATACTTTCCCGGTCAAAAAACTCTCACCGCCGGCAACCATACGCACCACCCCTGTCGCCGTTAAACCACCGCCCTCTCCGCCGGCGTGGATTATCTCTCATCCGGTAGGTCCCCGATCCGGAACGCAGAAACGTCCGGCAATGATGAATAGAGACGACGCATCTTTCCGGCGGAATTTCTCAGCCTTCGCGGCGGCTGCTGCGGCGGCAGCAGAGGCAGAAAGCGGGGAGTCGGAAGAAAGAAGGTCGAGCAGTGGAACAGGAAGCGGCAAGAAGGTAAAGGAAAGTGATCGGAATATGGAGTTTGGTTACAGAGAGCTTGCTCAGGCTATAGAGAAGTTCGGCAAAGTATATGAGAGAGTTGAAGCTTCAAAACAGAGACAAATGGTGGAATTGGAGAAGCAGAGGATGCAATTTTTGAAGGATTTGGAGTATCAGAGAATGCAGATATACATGGAAACACAGGTTCATCTTCATAAAACCAAACGCACTAAGCGTTCTTCTGGTTCTGATAGTTTATCGTAG 903 0.5382 MDSIGGAPSPVNFAPPRPPSSSPFPGREDCWSEDATSTLVDAWGERYLDLNRGNLRQKHWQEVADAVNDVHAAGNNKKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFSRLDILIGDTFPVKKLSPPATIRTTPVAVKPPPSPPAWIISHPVGPRSGTQKRPAMMNRDDASFRRNFSAFAAAAAAAAEAESGESEERRSSSGTGSGKKVKESDRNMEFGYRELAQAIEKFGKVYERVEASKQRQMVELEKQRMQFLKDLEYQRMQIYMETQVHLHKTKRTKRSSGSDSLS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02183 300 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 18 291 IPR044823 -
Trre8g02183 300 Pfam Myb/SANT-like DNA-binding domain 28 122 IPR044822 -
Trre8g02183 300 Gene3D - 31 99 - -
Trre8g02183 300 FunFam trihelix transcription factor ASIL2 31 99 - -
Trre8g02183 300 MobiDBLite consensus disorder prediction 1 30 - -
Trre8g02183 300 MobiDBLite consensus disorder prediction 197 223 - -
Trre8g02183 300 MobiDBLite consensus disorder prediction 200 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02183 Trre-Chr8 17521581 17524425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02183 26 289 Trihelix Transcription Factor Family AT3G14180 36.599 3.01e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre8g02183 Myb_DNA-bind_4 3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02183 - - lang:109355153 374.015