Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02164 ATGAGGAGCACAACCGGAGGAGAGATAGTTCAAGTTGAAGGAGGCCACATAGTTCGATCCACCGGTAAAAAAGATCGACATAGCAAGGTTTACACGTCAAAAGGACCTCGTGATCGTAGGGTTCGTCTCTCAGCACACACAGCCATCGAATTCTACGATGTTCAAGATCGCCTTGGCTACGACCGACCAAGTAAAGCAGTGGACTGGCTCATCAAGAAAGCAAAGTCTTCCATTGACAAACTCGCCAAGCTTCCTCCGTGGCATCCGATCGGCGAAAATCAAACACTAAAATCTCAAGAAGAAGAGCAGAATGCAGCTGCAAACACAACTAGTATGGTTATTGGAGAATCTAATAGTTACAGTTTTCATCTCTTAAGTGAGAATCAAGGTAACAATTCATCTTTCATTTCACCACATGATGTTGAAACTGATCCTACACCTTTCATTCCTACTACCTCTTCTACTTCTTCATCCATGAATTTCCAAAACTACCCTTCTGAAAACCTTGGCCTCTCTCTTCATACCTTCCAAGATCACAATGGTTTCATTCCTTGGCAATCACAACAAGTATGTGAAAACCATGAAACTTCAAATGCAAACCAAAACCAAGCACTTTTTGTGAACCAATATCAAAGAATTGTGAATTGGAACAATGAAACAACAAATGAATATATAAAAAAAGTTGGATTCATGGTAAACTCAAATCCATTTCTAAGTCAAGGTTCAGAATACTCTCCAAATGAGACACTTGAGTCGAATTTTTCGCATTCGGTTAGAACATGGAATGAAATTCCTATGGCTGTTTCTTCTCAACAAGTTCATCAAGCTTCAATCTTTGGAAACAGATTTGGTTCTAATGGATTAGCAGGGTTCTGCATTGCTGATACAGTTCAAGGTGGTGAAGAGGGTCATGGAGTTTCTTCTTCTAACAACAATTGA 939 0.3994 MRSTTGGEIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLPPWHPIGENQTLKSQEEEQNAAANTTSMVIGESNSYSFHLLSENQGNNSSFISPHDVETDPTPFIPTTSSTSSSMNFQNYPSENLGLSLHTFQDHNGFIPWQSQQVCENHETSNANQNQALFVNQYQRIVNWNNETTNEYIKKVGFMVNSNPFLSQGSEYSPNETLESNFSHSVRTWNEIPMAVSSQQVHQASIFGNRFGSNGLAGFCIADTVQGGEEGHGVSSSNNN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02164 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 265 IPR005333 GO:0003700
Trre8g02164 312 Pfam TCP family transcription factor 21 139 IPR017887 -
Trre8g02164 312 ProSiteProfiles TCP domain profile. 23 81 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02164 Trre-Chr8 17341150 17342088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02164 7 305 TCP Transcription Factor Family AT1G53230 37.822 3.01e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre8g02164 TCP 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02164 - - vun:114168475 305.834