Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02159 ATGGAGTCTTATTGCTTCCTACGTTTCTTCCACTCTGCAATTGCATCTTTTCTTCTCTTCTCTTCTGCCACTTCTTGTCTTTCACACCCTTCTCTCCTTGGCGTTCACCCTCTAGATGTGAAATATTATAGCTTTCAGTTCATCAAGTGCAAGGATGGATCCAAATCCTTCTCTAAAGATCGTCTCAATGATAATTTCTGTGACTGCTCTGATGGCACTGATGAACCTGGAACTTCAGCTTGTCCAGCAGGAAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACAGTTTATAGTTTCTTCCCATGTTAATGATCGTTTTTGCGATTGTTGTGATGGGAGTGATGAATATGATGGAACCCTTCATTGTCCCAACACGTGTGTTATGGGTGGCAATGCAGAGAACATGTATGGGAATTATAATTCAAGAGTGAGTGATCAGGGCATTTTTGCTGAAAAAGAAGCAAAAGATGGAGTGAAGTCAGAGGAATCAGTTCATAACATTAATGGTTTGAAGTTGGCAATTATTCTACAAGTGGTTCTAGTTGTTTTTCTGGTAGTTATCTGGAGTTTTCGTTGCCACACCAGATATAGGAGGAGGCGTTCCCGCTGA 612 0.4118 MESYCFLRFFHSAIASFLLFSSATSCLSHPSLLGVHPLDVKYYSFQFIKCKDGSKSFSKDRLNDNFCDCSDGTDEPGTSACPAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTLHCPNTCVMGGNAENMYGNYNSRVSDQGIFAEKEAKDGVKSEESVHNINGLKLAIILQVVLVVFLVVIWSFRCHTRYRRRRSR 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02159 203 Pfam Glucosidase II beta subunit-like 28 133 IPR028146 -
Trre8g02159 203 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 163 IPR039794 -
Trre8g02159 203 Gene3D - 77 128 IPR036055 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02159 Trre-Chr8 17292538 17294316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02159 23 160 Calmodulin-binding Proteins AT5G56360 53.237 4.63e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02159 - - tpra:123907740 309.686