Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02146 ATGATGAAAGAAAATTCCGAGGGAAAATATGGATCTTCATCTCAAAAATCCATGAAAGAGAAGGAGAAACATCTGGTGGATAAGATTCAAGGGATTTTCACAAATCTTCAGTCTGCAAGAAAAGAAAGCAGGGCTAATGACATTGTGATATGTGAGGAGCAGATGCATCAGTTGCTTCGAGAGTGGAAGGCGGAACTCGAGTCTCCAACTACCTCCTTAGCTGATGGGAGCCTTGGTTCGTTTACTGGGGAACTAGCCCAACTGTTGCAAGAAATTGAGGAGAAAGATGATGCAACAAGTCCATTTACAAGCCCTGTGCCACTGAAGACTGGTCTTCATCAAAATAACATTAGCGATGGCAATTATCCATTTTTTCAGGAGAATTGTTTTGAGAATAACCAACCACTAGATCATACTTTTAAAGGCGCTGCTTCATCTCTGTTCAACACTCCTTTAACTAACTCAGAAATGGCTCAGTTGGATTTTCATCCATTTGGTTTAAATCAAGATATGGATCACAATGCTGTAGGTCACAACTCTGATATGATTGGCCGGTTTAACTTGTATCAGGACCACAGCCTCGGGCACGAAACAGAAATAAAAAACTCAGAGTCAACTCAATTTAGTTTTGAAGAAGGCATTGATTGTGCTCAATTTTTCGGAGATAATGACACCACAAAATTTGGAGACAATCTTATACCTAACATCCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCCTATCCCCAAAATGTGCACTGTGGGACTGTTTCAGGCCTGCTCAAGGGTTAGAATGGTGCCAGGACTACTGTAGTAGTTCTCATGAGCTTTTGGCAAATAATGAAGGTCTCCCTGGCATGACTCCAATTTTGCGACCTGGTGGCATTGATATAAAAGACGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACAATGGGAAAAGAAGTGGGCATCCCTAAGTGTGAAGGTGCTGCTTCAATGAAAGCCCCCTGGAATGCTTCAGAGTTCTTTGACATTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTGTTCTTTGACAAGCCTAGAAGGGCATTCGACAGTGGAAATAGGAAACAGAGATCACTCCCTGATTACAATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACACGGGGGACATAAGAGATCCTATTACATGGATCCCCAGCCTCCTAATCGTGATTGGCATTTGTACGAGTATGAGGTCAATAGCCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTAGATAAAAAGAAAAGTCCTAAGGGAAAAGTGTCTAAGGATTCTCTTAATGATTTGGAAAACAAGATGGGAAAGCTAACAGCTGCTTTTCCATCGCCAGACAATGGTAAACCTGTCAAAGGAAAAACTGATGCCAAGTCTGAGAATGTTGGCCAGCCTGCCTGA 1452 0.4249 MMKENSEGKYGSSSQKSMKEKEKHLVDKIQGIFTNLQSARKESRANDIVICEEQMHQLLREWKAELESPTTSLADGSLGSFTGELAQLLQEIEEKDDATSPFTSPVPLKTGLHQNNISDGNYPFFQENCFENNQPLDHTFKGAASSLFNTPLTNSEMAQLDFHPFGLNQDMDHNAVGHNSDMIGRFNLYQDHSLGHETEIKNSESTQFSFEEGIDCAQFFGDNDTTKFGDNLIPNILPNICPPPSAFLSPKCALWDCFRPAQGLEWCQDYCSSSHELLANNEGLPGMTPILRPGGIDIKDGPLFAAVLAKTMGKEVGIPKCEGAASMKAPWNASEFFDISFLEGETVREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKEHGGHKRSYYMDPQPPNRDWHLYEYEVNSHDGCALYRLELKLVDKKKSPKGKVSKDSLNDLENKMGKLTAAFPSPDNGKPVKGKTDAKSENVGQPA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02146 483 MobiDBLite consensus disorder prediction 1 21 - -
Trre8g02146 483 MobiDBLite consensus disorder prediction 434 449 - -
Trre8g02146 483 MobiDBLite consensus disorder prediction 434 483 - -
Trre8g02146 483 PANTHER TRANSCRIPTION FACTOR VOZ1 2 477 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02146 Trre-Chr8 17202182 17205547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02146 1 460 VOZ-9 Transcription Factor Family AT1G28520 51.078 1.20e-152 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Trre8g02146 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02146 - - psat:127101646 824.313