Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02073 ATGGCTAATTCAGTAACCATGCACAAAGTAATCTCAATTATTTTCATCTTAATCACTCTTTTCTCATCAAAAGCACTAGCTGATTGTGAAACCGATTCTTCAAACAAATGCAACAACAAAGAAAAAGCTCTGCCACTAAAAATAATATCAATATTTGCAATATTATTAACTAGCATGATTGGTGTGGGTTTACCCTTGGTGTCACGTTCGATCCCGGCCTTAAGTCCGGACCGAGATCTCTTCGTAATCGTGAAGTGTTTTGCAGCCGGTATTATTCTTGGGACTGGATTCATGCATGTACTTCCTGATTCGTACGACATGCTATGGTCGGATTGTTTGGAGGAGAAACCATGGCACGAGTTTCCGTTTTCGGGACTTGTGGCCATGTTCTCTGCTTTGATCACAATGATGGTGGATTCTTTGGCTACTAGTTATTATAGTGGGAAGGGTACCAAGAGTGGTGTTATAATTCCACATGGACATGGTGGTGATCAAGAGATGGGTGATGTTAATGTTGGTCAATCACATGGTCACCATCACATGCATAACGAGGTCAAGATCGAAGAGAGCGGAGCGTCACAACTTCTACGTTATCGCGTAGTTGCCATGGTATTGGAACTTGGAATTGTTGTTCATTCGGTGGTGATAGGACTTTCCATGGGAGCCTCCAACAACACTTGCTCATTAAAAGGTCTTGCGGCTGCCCTTTGCTTCCATCAAATGTTCGAAGGCATGGGTCTTGGTGGCTGCATTCTCCAAGCAGAGTACAAGTGGTTAAAAAAGACCATCATGGTATTCTTCTTCTCAATTACAACACCACTTGGAATTGCATTAGGAATTGCAATGTCATCTAGTTACAAAGAGAACAGTCCAAAAGCACTTATCACCGTTGGATTACTTAATGGATCATCTGCTGGTCTTTTAATCTACATGGCTTTGGTTGATTTGCTTGCTGCTGATTTCATGAGTAAGAGGATGCAGGGTAGTATTAAGCTTCAATTAAAATCTTACATTGCCGTATTCATTGGTGCTGGTGGCATGTCTCTCATGGCTAAATGGGCTTAA 1065 0.4178 MANSVTMHKVISIIFILITLFSSKALADCETDSSNKCNNKEKALPLKIISIFAILLTSMIGVGLPLVSRSIPALSPDRDLFVIVKCFAAGIILGTGFMHVLPDSYDMLWSDCLEEKPWHEFPFSGLVAMFSALITMMVDSLATSYYSGKGTKSGVIIPHGHGGDQEMGDVNVGQSHGHHHMHNEVKIEESGASQLLRYRVVAMVLELGIVVHSVVIGLSMGASNNTCSLKGLAAALCFHQMFEGMGLGGCILQAEYKWLKKTIMVFFFSITTPLGIALGIAMSSSYKENSPKALITVGLLNGSSAGLLIYMALVDLLAADFMSKRMQGSIKLQLKSYIAVFIGAGGMSLMAKWA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02073 354 PANTHER ZINC/IRON TRANSPORTER 43 351 - -
Trre8g02073 354 Pfam ZIP Zinc transporter 46 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre8g02073 354 NCBIfam ZIP zinc/iron transport family 29 354 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02073 Trre-Chr8 16655656 16657242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02073 23 354 Inorganic Solute Cotransporters AT1G31260 63.205 1.36e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02073 K14709 - gmx:100795511 536.184