Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02037 ATGGAGTACTACCTAAAATTTGTCCCTCTCATTTGCACTTTATATGCATGCATTCATATCATAGCCTTTAGCCTACTTCACAAAAACACAAAATCTCCAAAGCTCCCACCAGGTCCTCCTTGTTATCCCTTAATAGGAAATAGATTGCAACTTGGTCCTTCAAAACTTCACCAAACACTTGCTAAACTCTCCAAAACATATGGACCAATCATGACTGTTAAAATTGGCACTATTACCACTGTGGTTATTTCCTCTCCAAAGATAGCCAAAGAAGCACTTCATAAAAATGACCAAGTTTTATCTAATAGATTTGTGCCACAATCTGTCCAAGCACTTTCACATGATAAAGCTTCTCCAATATTCATGCCTATTTCACCTAAATGGAAGACCCTTAGAAAAATTTGTGCTACCAAGATATTCTCTTCTCAACAGCTTGATTCTACTCAAGTTCTTCGTTTAAAAAAATTGAAAGAACTAGTTGTTTACTTGCAAGAAAATTGTAGAAAAGGTAAACCTATTGATATTGGTGAGGTTGCATTTACTATATCACTTAACTCAATATCAAACACCCTTTTCTCCATAGACTTGGCTAGTTTTACTTCTGGTTCTTCTCAAAAGTTTAGACATATTATTTCCTCCATGTTGATCGATTCTTCAAAGCCAAATATCGCAGACTATTATCCTATTTTGCGTAAAATTGATCCGCAGGGAGTGCGACGAAGGATGAGCAACCATTACCAGAAGTTGTTGACACTTTTTGAGTCTATCGTTGAAGGTAGAACAAATCAAAAGGAAGATTCTACGATGGAAGAAAGCGATGTGTTAGACTCATTTCTTGAGATTATACAGAAGGAAAATCCGGAATTGACATTACACGATTTATTACATCTATTTTTGGACTTATTTGTAGCTGGGACAGACACAACATCAGGCACAATTGAATGGGCAATGGCAGAGTTGCTACAAAATCCAGAGAAATTGAAGAAAACAAGAAATGAACTTCAACAAGTTATCAACAAAGATGAAGAACCTAAGGATTCAGATATCTATAAGCTCCCTTACCTACAAGCAGTTGTAAAAGAAACTCTTAGGTTGCATCCAACAGCTCCTATACTAGTTCGCGAATCTGGATCCGAGGTTGACTTATGTGGCTTCACAGTACCGAAAGATACACTAGTTCTTGTTAATGTGTGGAGCATGGGAAGAGACTCAAGCATTTGGACTAACCCAAATTTGTTTCTGCCTGAAAGATTTTTAGAAAGTGGAGAAGGTTTTATAGGAGATGATTTTGGGTTCATTCCCTTTGGAGCTGGTAGAAGAATGTGTTCTGGAGTTCCATTTGCTCATAGGGTTGTGCATACTATGTTAGCCACTTTGCTTTACTATTTTGATTGGAAGCTAGCTGATGGGGAGAAAATTGAAGACATTGACATGACTGAAAAATTTGGAACTACTTTGCATAAAGTCAAGCCTCTTATGGTTATTCCTGTCAAAGAATCATGA 1503 0.3699 MEYYLKFVPLICTLYACIHIIAFSLLHKNTKSPKLPPGPPCYPLIGNRLQLGPSKLHQTLAKLSKTYGPIMTVKIGTITTVVISSPKIAKEALHKNDQVLSNRFVPQSVQALSHDKASPIFMPISPKWKTLRKICATKIFSSQQLDSTQVLRLKKLKELVVYLQENCRKGKPIDIGEVAFTISLNSISNTLFSIDLASFTSGSSQKFRHIISSMLIDSSKPNIADYYPILRKIDPQGVRRRMSNHYQKLLTLFESIVEGRTNQKEDSTMEESDVLDSFLEIIQKENPELTLHDLLHLFLDLFVAGTDTTSGTIEWAMAELLQNPEKLKKTRNELQQVINKDEEPKDSDIYKLPYLQAVVKETLRLHPTAPILVRESGSEVDLCGFTVPKDTLVLVNVWSMGRDSSIWTNPNLFLPERFLESGEGFIGDDFGFIPFGAGRRMCSGVPFAHRVVHTMLATLLYYFDWKLADGEKIEDIDMTEKFGTTLHKVKPLMVIPVKES 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02037 500 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 498 - -
Trre8g02037 500 CDD CYP76-like 64 496 - -
Trre8g02037 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 Pfam Cytochrome P450 36 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Trre8g02037 500 Gene3D Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02037 500 FunFam Cytochrome P450 76C4 27 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02037 Trre-Chr8 16319492 16321094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02037 10 499 Cytochrome P450 AT2G45550 43.461 2.24e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02037 - - tpra:123908921 672.93