Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02031 ATGGAGAACATTTTAGGTCTTATCAGATTTCGTATCAAAAAAGGCACTAATCTCATACCTCGTGATTCTCGTACCAGTGACCCTTATGTTGTTGTCACCATGGCTGAACAGACACTGAAAACTGGTGTTGTCAAAGATAACTTACATCCTGAATGGAATGAAGAATTAACACTTTATATTCAAGATAAAGATCTTAACACACCAATACAACTGACAGTCTGCGACAAAGACACTTTCACTGTGGATGACAAAATGGGCGAAGCAGACATAGACATAAAACCATATCTTCAATGTGTGAAGATGGGATTGAATGATCTTCCAGATGGACATGTAGTCAAAACGATTCAACCAGATAGGACGAATTGCCTTGCCGAAGAAAGTAGCTGCATATGGAGAAATGGTAAAGTTGTCCAAGAAATGAGTTTAAGATTGAGAAACGTTAAGTCTGGTGAAGTACTCGTTGAAATTGAGTGGATCGATGTTACAGATTCCAAAGGCTTATCAGAAGTTGAGATTTAG 519 0.3815 MENILGLIRFRIKKGTNLIPRDSRTSDPYVVVTMAEQTLKTGVVKDNLHPEWNEELTLYIQDKDLNTPIQLTVCDKDTFTVDDKMGEADIDIKPYLQCVKMGLNDLPDGHVVKTIQPDRTNCLAEESSCIWRNGKVVQEMSLRLRNVKSGEVLVEIEWIDVTDSKGLSEVEI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02031 172 Pfam C2 domain 7 94 IPR000008 -
Trre8g02031 172 SMART C2_3c 7 104 IPR000008 -
Trre8g02031 172 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Trre8g02031 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 160 IPR035892 -
Trre8g02031 172 Gene3D C2 domain 4 170 IPR035892 -
Trre8g02031 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 165 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02031 Trre-Chr8 16262773 16264249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02031 39 168 C2H2 Transcription Factor Family AT1G70790 56.061 3.08e-45 144