Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02012 ATGGAACCTAGTACTAGTAGTAGCAACACTATAGATACATCAAATTTTGTGGAAATATCAATGGATGTACATCAAGTTGTTCCACCACCACACATGAGCACTATACAAAGAATCAAAAACAAATTCAAAGAAACATTTTTCCCTGATGATCCTATGCGCCAATTTAAAGGACAACCACTTAATAAAAAGTTCATCCTTGGAGTTCAATATTTTTTCCCTATTCTTCAATGGTTACCTAATTATAGTTTCAAACTCTTTAAATGTGACCTTATTGCTGGCCTCACCATTGCTAGCTTAGCCATCCCACAGGGAATTAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTATGGGACTTTATTCAAGTTTTGTTCCACCACTACTTTATGTTATTCTTGGAAGTTCAAGGGATCTTGCTGTAGGACCTGTTTCAATTGCCTCTCTTGTTTTGGGATCTATGCTTGCAGAGGAAGTATCTCCCAAAACACAACTTGGTCTTTTTATTCAGTTAGCTTTTACTTCAACTTTTTTTGCTGGTATTTTTCAAGCTGCTCTTGGAATTCTAAGGCTAGGATTTATTATTGATTTTCTATCTAAGGCGATTCTGATTGGGTTTATGGCTGGAGCTGCTATTATTGTGTCTCTACAACAGCTAAAGAGTTTACTTGGAATCACACATTTTACTAAAGAGATGAGCATTATTCCTGTCATGCGTTCTGTTTTTGACCATATCGATGAGTGGTCATGGGAAACAATAGTGATGGGGGTTTTCTTCTTGATGATACTTTTGCTTGCAAGACACATTACAATAAGGAAGCCGGAACTATTCTGGGTATCGGCCGGAGCTCCTCTTGCTTGTGTTATCATTTCTACCATCCTTAGTTTTGTAATCAAGGGTGAACATCATGGCATCAGTATAGTTGGGAAATTGGAACAAGGAATAAATCCAGTTTCAACCAAGATGTTGCTTTTTCACGGAAATTATCTTGGTCTAACCATCAAAACCGGGATCATCACTGGAATTTTATCGCTCACCGAAGGAATTGCAGTTGGGAGAACATTTGCAGCTTTCAGAAATTACAAAGTTGATGGAAATAAAGAAATGATAGCAATTGGTTTCATGAATGTGGTTGGCTCTACTACATCTTGCTATGTCACAACAGGATCATTTTCTCGGTCGGCTGTGAATCATAACGCGGGTGCAAGAACAGCAATGTCAAACGTAGTAATGTCCTTGACAGTCATGGTGACACTCCTGTTTCTTATGCCATTGTTTCGGTACACGCCTAATGTTGTATTGGGTGCAATCATAATAACAGCAGTAATTGGCCTCATTGATATTTCTGCTGCTTATCTCATTTGGAAGATCGATAAATGCGATTTCATTGTGTTGTTGACTGCTTTCTTTGGTGTTATCTTCCTCTCTGTCCAGTACGGTCTCGCTCTTGCAGTCGGATTGTCAATTTTTAGGATCATACTGCAAATTACAAGGCCTAAGACAGTGATGTTGGGGAACATACCGGAGACAAACATATATAGAGATCTTCACCATTATAAAGAAGCTATAAGAGTACCTGGTTTTCTTATTCTAAGTATAGAAGCACCAATCAATTTTGCTAACATCACATATCTTCATGAGAGGATATTGCGATGGATAGAAGAAGAGGAGGATACCAGAACAGAAAACTCCGGCCTTCGATATGTTATTTTAGAAATGTCAGCTGTGAATTCCATAGACACAAGTGGAGTCTCACTTTTCAAGGAGTTAAAAGTAGCATTAAAAATGAAGGGTGTTGAGCTTGTATTGGTGAATCCTCTAGCTGAGGTTATTGCAAAGCTGAAAAAAGCAGATGAAGCTAATGATTTTATAAGAGCAGATTACCTTTTCTTGACAGTTGGAGAGGCTGTAGCTGCACTTTTATCAGCAATGAAAAGCCAATCACCAAGCATGGATGAAGAGTTACATACAATTGTGACTGAATGTTGA 1986 0.3822 MEPSTSSSNTIDTSNFVEISMDVHQVVPPPHMSTIQRIKNKFKETFFPDDPMRQFKGQPLNKKFILGVQYFFPILQWLPNYSFKLFKCDLIAGLTIASLAIPQGISYAKLASLPPIMGLYSSFVPPLLYVILGSSRDLAVGPVSIASLVLGSMLAEEVSPKTQLGLFIQLAFTSTFFAGIFQAALGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMSIIPVMRSVFDHIDEWSWETIVMGVFFLMILLLARHITIRKPELFWVSAGAPLACVIISTILSFVIKGEHHGISIVGKLEQGINPVSTKMLLFHGNYLGLTIKTGIITGILSLTEGIAVGRTFAAFRNYKVDGNKEMIAIGFMNVVGSTTSCYVTTGSFSRSAVNHNAGARTAMSNVVMSLTVMVTLLFLMPLFRYTPNVVLGAIIITAVIGLIDISAAYLIWKIDKCDFIVLLTAFFGVIFLSVQYGLALAVGLSIFRIILQITRPKTVMLGNIPETNIYRDLHHYKEAIRVPGFLILSIEAPINFANITYLHERILRWIEEEEDTRTENSGLRYVILEMSAVNSIDTSGVSLFKELKVALKMKGVELVLVNPLAEVIAKLKKADEANDFIRADYLFLTVGEAVAALLSAMKSQSPSMDEELHTIVTEC 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02012 661 PANTHER SULFATE TRANSPORTER 35 641 IPR001902 GO:0016020|GO:0055085
Trre8g02012 661 NCBIfam sulfate permease 73 635 IPR001902 GO:0016020|GO:0055085
Trre8g02012 661 FunFam Sulfate transporter 31 497 642 - -
Trre8g02012 661 Gene3D STAS domain 497 641 IPR036513 -
Trre8g02012 661 SUPERFAMILY SpoIIaa-like 523 639 IPR036513 -
Trre8g02012 661 CDD STAS_SulP_like_sulfate_transporter 518 632 - -
Trre8g02012 661 ProSiteProfiles STAS domain profile. 517 639 IPR002645 -
Trre8g02012 661 Pfam Sulfate permease family 86 465 IPR011547 GO:0016020
Trre8g02012 661 Pfam STAS domain 518 635 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02012 Trre-Chr8 16085381 16091550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02012 18 646 Inorganic Solute Cotransporters AT3G15990 62.599 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02012 K17471 - gmx:100819130 973.385