Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02010 ATGGATGATGAAGTTGTTCAGCGAGTTTTCCATGAAGGTGGACGCGATTACTTCCAACAACAACCTTCAACTTCTTCCTCATCGATTCTTCAATCTCTCCCTCTCCACGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTACGAGAGAAAAAGGATGGCCTTGTTACAGTTGGCATTGGTGGTCCGAGCGGTTCTGGTAAAACAAGCTTAACAGAAAAGGTGGCATCTGTTTTTGGCTGTACTGTTATATCAATGGAGAATTATTGTGATGGAGTTGATGAAGGGAATGTTCTGGATTCTATAGATTTTGATACCTTGATCAAGAATCTTGAGGATTTGACAAAAGGCAATGATACATTAGTTCCAGAGTTTGATTATCAGCAAAAGAGACGGGTTGGCTATAAAAAAATAATGAGTGCTTCATTTGGGGTGGTAATAGTTGATGGTACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCAGTGGTTGGCGGTGTTCATTTTAGCCTACTTTCTAAAGTTCGGTATGACATTGGAGATTCTTGTTCACTGGATTACCTAATAGATAGCATTTTTCCATTATTTAGGAAGCACATCGAGTCAGATCTTCATCATGCACAGATCAGAATTAACAACAGCTTTGTGTCATCGTTTAGAGAGGCAATCTACAAGGTCAAATGCAGAAGCAAGTCTTCAGATGAACATCCAGGTTCTTCCTTGCAAGGAAATCAAGCTCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCGGCTAGTGAAGAAGCAGGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGGTACTATTTATCCCTTGGTGACCAGAGGATTGTCGACAAAAATTTCATCATCCGGCCGAAAGCTGAGTTTGAGGTTGGACGAATGACGTTGGGCGGGTTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGCGCATCCACAACTGTCAATTATGGCAAGGTTTCAATGTCATTTGAAACTATTGATGTTCTTGGTGAGACATTCATGGTCATGAGAGGAACCGATAGGAAGACTGTTGGAACAGAAGCATTGAGGATGGGTATCAATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCCCGGCTTAGTACACCACCACTTGTGTCTAATACAACTGTGGCTGGCAGTCAAGAAACAGTAATAGTTGCACCAAAGCCAATTCGTGTTACTGCCAATGTTGTTACTGGACTTGAGGATTTATCTCAGCCATGGACTCGATCCCCAACTAAATCAAAAACAGAACCTTTTGTGGCTACCTGGCATTTCACGTCTTCAGATTCCTCCCATCATGACAACACAGTCCTAGACCCCTCTTCTTTCAGGGACACTGTTAAGCTTGCTCCAATGCCTGATTCATATGACCTGGATAGGGGACTGCTTTTGGCAGTTCAAGCCATACAAGCTTTGTTGGAGAATAAAGGTGCCCCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAACATAATTGGTTGTGAAATAGTTTCCCTAGAAAGTTATTACAAAGAAGTTAAGGATTTTAAATATGATGACTTCAGCTCACTTGATTTATCTTTGCTATCAAAGAATATTGATGATATAAGAAATGGCCGAAGAACCAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGTGTCTATGCTTTGCATCCCGATATCCGAATATCACTTGATTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTAATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGGTGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCAATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAACGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCACTGTTTGTATTGAAGAGTAACAAAAAAGTAGGTTATCAAGATATTCTAGCAATTCTTGATCCAGCAAAATTTTGCAGTTCAGTGCAGAAGTTTATTGATATTTATATGAGACTTCCTGGGATCCCTTCTAATGGTCAACTGACAGATAGTGATTGTATTCGGGTCAGAATATGTGAAGGCAGATTTGCATTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACTACGGTTGCTGGTCTTCTTAACCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTGCAAGATGTCCCTGGTCAATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCGTATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAATAGAGAGAAGTTCTGGTGGGATTAACTTTCAGCAATCAACAAGGCTGCTAGAGATTGTGGACTTTATTCAATCTCAGGGATGTAGCTCTTCTTCAGAATCCTCGTCAAGTAGGGTAGTCTCTCCAATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTTGAAAAATGGCTTGCTATAAATACGGTTCTCTGGACATTTCTAATGTCAGCAATTGTTGGTTATTCACTTTATCAAAGGAGGCGTCAATGA 2853 0.3999 MDDEVVQRVFHEGGRDYFQQQPSTSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVFGCTVISMENYCDGVDEGNVLDSIDFDTLIKNLEDLTKGNDTLVPEFDYQQKRRVGYKKIMSASFGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIESDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDEHPGSSLQGNQAQTDNFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNYGKVSMSFETIDVLGETFMVMRGTDRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETVIVAPKPIRVTANVVTGLEDLSQPWTRSPTKSKTEPFVATWHFTSSDSSHHDNTVLDPSSFRDTVKLAPMPDSYDLDRGLLLAVQAIQALLENKGAPVIVGIGGPSGCGKTSLAHKMANIIGCEIVSLESYYKEVKDFKYDDFSSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVGYQDILAILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGQYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTIERSSGGINFQQSTRLLEIVDFIQSQGCSSSSESSSSRVVSPIEGIIEEMQSKIRRLEKWLAINTVLWTFLMSAIVGYSLYQRRRQ 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02010 950 PANTHER URIDINE KINASE 468 873 - -
Trre8g02010 950 CDD UMPK_like 62 224 - -
Trre8g02010 950 Gene3D - 702 862 - -
Trre8g02010 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 172 IPR027417 -
Trre8g02010 950 CDD UMPK_like 517 685 - -
Trre8g02010 950 Gene3D - 61 242 IPR027417 -
Trre8g02010 950 Pfam Phosphoribulokinase / Uridine kinase family 517 682 IPR006083 GO:0005524|GO:0016301
Trre8g02010 950 Pfam Phosphoribulokinase / Uridine kinase family 106 202 IPR006083 GO:0005524|GO:0016301
Trre8g02010 950 PRINTS Uridine kinase signature 515 532 - -
Trre8g02010 950 PRINTS Uridine kinase signature 542 553 - -
Trre8g02010 950 PRINTS Uridine kinase signature 636 646 - -
Trre8g02010 950 SMART AAA_5 59 209 IPR003593 GO:0016887
Trre8g02010 950 SMART AAA_5 514 658 IPR003593 GO:0016887
Trre8g02010 950 SUPERFAMILY CYTH-like phosphatases 723 857 IPR033469 -
Trre8g02010 950 Gene3D - 514 691 IPR027417 -
Trre8g02010 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 685 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02010 Trre-Chr8 16059316 16074145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02010 510 713 PRT Gene Family AT1G55810 24.312 2.59e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02010 - - gmx:100778905 1680.61