Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02006 ATGTACAGAAAGCAGCATAAGAAGGCTTCTCATGGGGCAATCCAAAACCCTCAAGATTTGTGCCAATCATCTCAATACTTATACCTACTATGTCTGTGCAATAGCATGCTGGGAATGAGAAATCTTGCGTTTGGCATGCTAGGGATTTTGATGATGGTGAACTTAAGGATGAACTTTTCTGCATACGATTTCCTTCAATTGAAAAAAACTTTTGTGCGCTTTGTACAGGTAGCTTTGCTACCACATGCATTTATGATGCACTTGAGGAAGGGGATTCAAGCAATAATGAGGAGTCCACCACTTACTGGATTTTGGTCTACAACATACTTTGAAACAATTGTTATGCTTATAACATTTGCATTGTTGGGCAAATATTTGGAATGTCTTGCCAAAGGAAAGACATCTGATGCCATTAAGAAGTTAGTAGAACTCACTCCTGCAACAACTCTGTTGGTTGTTAAAGACAAAGCATATCCAAAGCATTTTAAGGCCTACTAA 498 0.3855 MYRKQHKKASHGAIQNPQDLCQSSQYLYLLCLCNSMLGMRNLAFGMLGILMMVNLRMNFSAYDFLQLKKTFVRFVQVALLPHAFMMHLRKGIQAIMRSPPLTGFWSTTYFETIVMLITFALLGKYLECLAKGKTSDAIKKLVELTPATTLLVVKDKAYPKHFKAY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02006 165 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 97 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02006 Trre-Chr8 16044940 16047042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02006 101 157 Primary Pumps ATPases AT5G44790 70.175 4.69e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02006 K17686 - gmx:100804960 103.219