Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01985 ATGGATGATTATAGAAAAGGGTCATCATCGTTATCTTACTACAATATTCTTGGTGTTAGTTCTGATTCTTCTATTGATGAAATAAGGCGTGCCTATAGAAAACTTGCAATGCAATGGCATCCAGATAGGTGGACAAGAACACCTTCTTTATTAAGTGAAGCCAAATGTAATTTTCAGAAAATTCAAGAAGCTTATTCAGTGTTATCTGATCCCAAGAAAAGAACTATGTATGATGCTGGCTTGTATGATCCTCAAGAGGAAGAAGATGAGGAATTTTCTGATTTTGTGGATGAAATGGTATCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTGGACGAGTTGCAGGCCATGTTTATGGAAATGGCAGAAGGATTTGAGTCTCCTCCCATGTATTATGGGACAACATCGATAATTAATGAATCCTCATGTGCTAACAGAGGAAGTGTTTTGACACAATAG 471 0.3779 MDDYRKGSSSLSYYNILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCNFQKIQEAYSVLSDPKKRTMYDAGLYDPQEEEDEEFSDFVDEMVSLMAEVRREEKVYGLDELQAMFMEMAEGFESPPMYYGTTSIINESSCANRGSVLTQ 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01985 156 Gene3D DnaJ domain 5 103 IPR036869 -
Trre8g01985 156 PRINTS DnaJ domain signature 14 32 IPR001623 -
Trre8g01985 156 PRINTS DnaJ domain signature 53 73 IPR001623 -
Trre8g01985 156 PRINTS DnaJ domain signature 32 47 IPR001623 -
Trre8g01985 156 CDD DnaJ 13 70 IPR001623 -
Trre8g01985 156 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Trre8g01985 156 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Trre8g01985 156 Pfam DnaJ domain 13 78 IPR001623 -
Trre8g01985 156 PANTHER PUTATIVE, EXPRESSED-RELATED 8 131 - -
Trre8g01985 156 SUPERFAMILY Chaperone J-domain 9 84 IPR036869 -
Trre8g01985 156 SMART dnaj_3 11 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01985 Trre-Chr8 15864377 15866415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01985 8 79 C2H2 Transcription Factor Family AT1G74250 47.945 2.69e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01985 - - tpra:123907280 272.322