Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01937 ATGAACTTTACTTGGGATTCAATGAGTGTGAAGCCACCTCTAACGAGCCAGTCTTCAATCTACTCCCTCACTTTTGATGAGTTACAGAACACCATTGGTGGAGTTGGAAAAGATTTTGGATCAATGAACATGGATGAACTCTTGAAAAACATATGGAATGTTGAAGAGACACAAACCTTAACAGGAGTAGGAGTGGGAGAAGGACCTAACCCAATTGTTAATAATATGCAAAGACAAGGCTCATTGACATTGCCAAGGACACTTAGTCAGAAAAAAGTTGATGAAGTTTGGAGGGATTTGATGAAAGATAATGGTAATAGTGGTTCATCTATGCCTCAAAGACAACCAACATTAGGTGAAGTGACTTTGGAGGAATTTTTGGTGAGAGCTGGTGTTGTGAAAGAAGATGCGCCGAATCATGCTCAACAAATCGAAAGACCAGATAATAATAAATGGTTTAGTGATTTTTCTAGATCAAACAATAACACCAATCTACTTCCCTTTCAACAACCAAATGGAAATAATGGTAATGGTGATTTGAGTGACAATAATAACTTAGTGCCTAAACAAATTCCTATTCCTCCTTCATCATTGAACCTGAATCAATCTCATCAGCCGCCACCACTTTTCCCGAAACCTACAAATGTAGCATTTACTGCTGCTCCTATTCATTTGTTAAACAATGCTCAACTTGGTAACCCTGGTAGAAGTGTAGTGCCTGGTGTTGGAATGTTTGGTTTATCTGCGGCGAATGTCGCAGCTCCTGTTGGTTCTCCAGGAAGTAAAATGTCGCCGGATGCAATTACAAAGCGTAATGTAGATCCTTCTTTACCGTCACCAGTTCCTTATGGAATCAACAGAGGGAGGAAGTGTGGTGCTGTAGAAAAAGTTGTTGAAAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCGAGGTCACGCGCTCGCAAACAGGCCTACACTGTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAATGAGGAATTACAAAGAAAACAGGCAGAACTTATGGAAGTGCAGAAAAATAAGGAGGACCTGCTACGGACAAATAAAATAATATTCTTGAGAAGGACACTTACAGGTCCATGGTAG 1125 0.4 MNFTWDSMSVKPPLTSQSSIYSLTFDELQNTIGGVGKDFGSMNMDELLKNIWNVEETQTLTGVGVGEGPNPIVNNMQRQGSLTLPRTLSQKKVDEVWRDLMKDNGNSGSSMPQRQPTLGEVTLEEFLVRAGVVKEDAPNHAQQIERPDNNKWFSDFSRSNNNTNLLPFQQPNGNNGNGDLSDNNNLVPKQIPIPPSSLNLNQSHQPPPLFPKPTNVAFTAAPIHLLNNAQLGNPGRSVVPGVGMFGLSAANVAAPVGSPGSKMSPDAITKRNVDPSLPSPVPYGINRGRKCGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAELMEVQKNKEDLLRTNKIIFLRRTLTGPW 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01937 374 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 374 IPR043452 GO:0003700|GO:0045893
Trre8g01937 374 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 298 355 - -
Trre8g01937 374 MobiDBLite consensus disorder prediction 143 205 - -
Trre8g01937 374 Gene3D - 298 356 - -
Trre8g01937 374 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 303 318 IPR004827 GO:0003700|GO:0006355
Trre8g01937 374 MobiDBLite consensus disorder prediction 256 284 - -
Trre8g01937 374 CDD bZIP_plant_BZIP46 300 354 - -
Trre8g01937 374 Pfam bZIP transcription factor 300 353 IPR004827 GO:0003700|GO:0006355
Trre8g01937 374 SUPERFAMILY Leucine zipper domain 300 350 IPR046347 GO:0003700|GO:0006355
Trre8g01937 374 SMART brlzneu 296 360 IPR004827 GO:0003700|GO:0006355
Trre8g01937 374 MobiDBLite consensus disorder prediction 138 207 - -
Trre8g01937 374 Coils Coil 319 360 - -
Trre8g01937 374 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 298 349 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01937 Trre-Chr8 15437010 15438633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01937 13 374 bZIP Transcription Factor Family AT4G34000 46.207 1.59e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre8g01937 bZIP_1 4.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01937 K14432 - gmx:100776600 431.795