Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01925 ATGGGTTGGCCTTATATTGGAGAAACTCTTCAACTCTATTCTCAACACCCTAACATCTTCTTTGCTTCTAAACAGAGAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCATGTGTGATGTTAGCAAGTTCCGAGGCAGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATATCCCAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTGTTCTTTCACCAAGGCCATTACCATACTCGCATTAGGAAACTCGTTCAAACCTCGCTTTCTCCTGAATCAATCAAGAAATTGATCCCCGATATAGAAATCCAAGTCATTTCCTCCTTGGAATCTTGGGTTTCTTCTGGACAAGTTGTTAACGCTTTCCAAGAAATGAAAAAGTTCTCATTCAATATCGGCATCCTCTCTGTATTTGGTAACTTGGAAGGCAATTATAGAGAGAAGCTTAAGGAGAATTACAACATTGTAGAGAAAGGATACAATTCTTTTCCAACTAGGATACCCGGCACTGCATACTCCAAAGCACTTTTGGCGAGGCAGAGGATTCAAGAGATTATAAGTAAAATAATTAGCAAGAAAAGGGAGCAGAGATTGATTGAGAAAAATCTATTGGGCCACTTGCTAAACTACAAGAATGAAAAAGGTGAAATATTAAGTGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTTTGACTTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCTATAAAAATGGAGCAAATGTCAATATACAAAGCTAATGAAGGAGGGAAGATGCCATTGACTTGGAATCAAACCAGAAATATGCCTATTACACACAGGGTAATATTGGAAAGCCTAAGGATGGCAAGCATAATCTCATTTACTTTTAGGGAAGCTGTGGATGATGTAGTATACAAGGGATATTTAATACCCAAAGGTTGGAAAGTAATGCCTCTGTTCAGAAACATCCACCACAATCCAGAATTCTACCCTGCTCCACATAGTTTTGACCCATCAAGGTTTGAGGTTTCCCCAAAGCCCAATACATTTATGCCATTTGGCAATGGAGTGCACTCTTGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTAATTCACCATCTAGTAACAAAATTTAGGTGGGAGGTATTAGGATACAATCAAAGTGGAGTTGAATATAGCCCATTTCCAATTCCAATGGATGGTCTACCAACAAGATTTTTGAGAGATCAATAA 1296 0.3773 MGWPYIGETLQLYSQHPNIFFASKQRRYGEIFKTHILGCPCVMLASSEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQTSLSPESIKKLIPDIEIQVISSLESWVSSGQVVNAFQEMKKFSFNIGILSVFGNLEGNYREKLKENYNIVEKGYNSFPTRIPGTAYSKALLARQRIQEIISKIISKKREQRLIEKNLLGHLLNYKNEKGEILSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKMEQMSIYKANEGGKMPLTWNQTRNMPITHRVILESLRMASIISFTFREAVDDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHSFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVLGYNQSGVEYSPFPIPMDGLPTRFLRDQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01925 431 PANTHER CYTOCHROME P450 26 1 415 - -
Trre8g01925 431 Pfam Cytochrome P450 3 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 Gene3D Cytochrome P450 1 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 FunFam Abscisic acid 8 1 429 - -
Trre8g01925 431 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01925 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Trre8g01925 431 CDD CYP90-like 25 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01925 Trre-Chr8 15334272 15337830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01925 1 429 Cytochrome P450 AT3G19270 71.795 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01925 K09843 - gmx:100806350 758.444