Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01924 ATGGAGATTATTGCAATTTTTGTTTACTTTTTCTTTTTTCTCTTAACTATCATCTCTTATCCATTCATAAAGAAGCACACTAAACACAAATTCACAACCAAGCCTAAGCTTCCCCCAGGTTCAATGGGTTGGCCTTATATTGGAGAAACTCTTCAACTCTATTCTCAACACCCTAACATCTTCTTTGCTTCTAAACAGAGAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCATGTGTGATGTTAGCAAGTTCCGAGGCAGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATATCCCAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTGTTCTTTCACCAAGGCCATTACCATACTCGCATTAGGAAACTCGTTCAAACCTCGCTTTCTCCTGAATCAATCAAGAAATTGATCCCCGATATAGAAATCCAAGTCATTTCCTCCTTGGAATCTTGGGTTTCTTCTGGACAAGTTGTTAACGCTTTCCAAGAAATGAAAAAGTTCTCATTCAATATCGGCATCCTCTCTGTATTTGGTAACTTGGAAGGCAATTATAGAGAGAAGCTTAAGGAGAATTACAACATTGTAGAGAAAGGATACAATTCTTTTCCAACTAGGATACCCGGCACTGCATACTCCAAAGCACTTTTGGCGAGGCAGAGGATTCAAGAGATTATAAGTAAAATAATTAGCAAGAAAAGGGAGCAGAGATTGATTGAGAAAAATCTATTGGGCCACTTGCTAAACTACAAGAATGAAAAAGGTGAAATATTAAGTGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTTTGACTTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCTATAAAAATGGAGCAAATGTCAATATACAAAGCTAATGAAGGAGGGAAGATGCCATTGACTTGGAATCAAACCAGAAATATGCCTATTACACACAGGGTAATATTGGAAAGCCTAAGGATGGCAAGCATAATCTCATTTACTTTTAGGGAAGCTGTGGATGATGTAGTATACAAGGGATATTTAATACCCAAAGGTTGGAAAGTAATGCCTCTGTTCAGAAACATCCACCACAATCCAGAATTCTACCCTGCTCCACATAGTTTTGACCCATCAAGGTTTGAGGTTTCCCCAAAGCCCAATACATTTATGCCATTTGGCAATGGAGTGCACTCTTGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTAATTCACCATCTAGTAACAAAATTTAGGTGGGAGGTATTAGGATACAATCAAAGTGGAGTTGAATATAGCCCATTTCCAATTCCAATGGATGGTCTACCAACAAGATTTTTGAGAGATCAATAA 1419 0.3735 MEIIAIFVYFFFFLLTIISYPFIKKHTKHKFTTKPKLPPGSMGWPYIGETLQLYSQHPNIFFASKQRRYGEIFKTHILGCPCVMLASSEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQTSLSPESIKKLIPDIEIQVISSLESWVSSGQVVNAFQEMKKFSFNIGILSVFGNLEGNYREKLKENYNIVEKGYNSFPTRIPGTAYSKALLARQRIQEIISKIISKKREQRLIEKNLLGHLLNYKNEKGEILSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKMEQMSIYKANEGGKMPLTWNQTRNMPITHRVILESLRMASIISFTFREAVDDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHSFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVLGYNQSGVEYSPFPIPMDGLPTRFLRDQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01924 472 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 CDD CYP90-like 66 467 - -
Trre8g01924 472 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PANTHER CYTOCHROME P450 26 35 456 - -
Trre8g01924 472 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Trre8g01924 472 FunFam Abscisic acid 8 27 470 - -
Trre8g01924 472 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01924 472 Gene3D Cytochrome P450 26 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01924 Trre-Chr8 15334272 15337953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01924 27 470 Cytochrome P450 AT3G19270 71.171 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01924 K09843 - gmx:100806350 790.801