Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01921 ATGGACATTATTATACTCCTCTTTCTTATCTTTCTCTCATCTCTCCTCTCATATCCATTCATAATCAAACACAACAAATTACATGAAACCATAGGCAAGCCTAAACTTCCCCCAGGTTCAATGGGTTGGCCATATATTGGAGAAACTTTTCAACTCTACTCTCAACACCCTAACATCTTCTTTGCTTCTAAACAAAAAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCATGTGTGATGTTAGCAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATATCCCAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTGTTCTTTCACCAAGGACATTACCATACTCGCATTAGGAAACTCGTTCAAACCTCGCTTTCTCCTGAATCAATCAAGAAATTAATCCCCGGTATTGAAAGCGAAGTCATTTCCTCCTTGGAATCTTGGGTTTCTCCTGAACAAGTCGTTAACGCCTTCCATGAAATGAAAAAGTTCTCTTTCAATATTGGCATTCTCTCTATCTTTTGTAACTTGGAAAGCAATTATAGAGAACAACTTAAGGAGAATTACTGCATAGTAGAGAAAGGCTACAATTCTTTCCCAAATAAGATACCCGGAACTTCATACTCCAAAGCTGTTTTGGCGAGGCAGAGAATTCAAGAGATTATAAGTGAGATAATTTGCAAAAGAAAGGAGCAAAGATCGATCGAAAAAGATCTATTAGGCCACTTGCTAAACTACAAGGACGAAAAAGGTGAAATTTTAACAGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTCTTACTTGGATTCTCAAGTATCTTCATGATGATCAGAAACTTCTTGAAGCAATAAAAGCAGAACAAATGGAAGTATATGAAACCAATGATGGAGGGAAGATTCCATTGACATGGAGTAAGATAAAAAATATGCCACTTACTCATAGGGTAATATTGGAAAGTCTAAGGATGGCAAGTATTATATCATTTACTTTTAGAGAAGCTGTAGTTGATGTGGTATACAAAGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTATTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCATAACTTTGACCCATCAAGGTTTGAGATTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTGCACTCTTGCCCAGGAAATGAGTTAGCCAAATTGAATATGTTGATATTAATTCACCATCTAGTAACCAAATTTAGGTGGGAGGTAGTGGAAAATCTGAATGGAATCCAATATAGCCCATTCCCAATCCCTCTGCAAGGTCTACCCACAAGATTTTGCAGAATCAAATAG 1413 0.3694 MDIIILLFLIFLSSLLSYPFIIKHNKLHETIGKPKLPPGSMGWPYIGETFQLYSQHPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQTSLSPESIKKLIPGIESEVISSLESWVSPEQVVNAFHEMKKFSFNIGILSIFCNLESNYREQLKENYCIVEKGYNSFPNKIPGTSYSKAVLARQRIQEIISEIICKRKEQRSIEKDLLGHLLNYKDEKGEILTDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMEVYETNDGGKIPLTWSKIKNMPLTHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEIAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVENLNGIQYSPFPIPLQGLPTRFCRIK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01921 470 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Trre8g01921 470 PANTHER CYTOCHROME P450 26 35 456 - -
Trre8g01921 470 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 CDD CYP90-like 65 465 - -
Trre8g01921 470 Gene3D Cytochrome P450 27 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 Pfam Cytochrome P450 37 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01921 470 FunFam Abscisic acid 8 26 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01921 Trre-Chr8 15307365 15310313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01921 2 468 Cytochrome P450 AT3G19270 69.165 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01921 K09843 - gmx:100806350 803.897