Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01902 ATGGCTGATTGCAAACGCGCTTCTCCAACAATTCTAGCTATCAACGACTCTTCTCCAAACGGAACCTCCATCTCCAAGAAAAGAAAACTTACTCCTTCTACTTCGCCTTCGCACTTACTAGCTTCTGAAATGCACCATCAAATTCCTAACTCGCTCAATGACTCACCGGAAAAAACTATATCAACGGTTAATTCCGCTGTCACCGTGGCTTCCAACGGAATTTCCTCGGATCACAGCCTGCTTACGTCTAGCTTCAGCTCCGGCAAGCTTACGAAAAGTGACGACGTCGTTAAGGAGCTCGACGCCACGCCGTTAGATCCGGAGCTGAAAACGAAGGGTTTTGAAACGGTAGATTCAAACGGAACAAAACGCAATATGAAATCGTTCAGGGAGGAAGAGATTGATGAATTCTTTGCAAGATTTGAGAGGGAAGAGCAGAAAAGATTTGCAGAGAAGTACAACTTTGATATTGTTACAGATTTGCCGTTAGAGGGTCGTTACGAGTGGGTTCGTTTACATTGA 522 0.4483 MADCKRASPTILAINDSSPNGTSISKKRKLTPSTSPSHLLASEMHHQIPNSLNDSPEKTISTVNSAVTVASNGISSDHSLLTSSFSSGKLTKSDDVVKELDATPLDPELKTKGFETVDSNGTKRNMKSFREEEIDEFFARFEREEQKRFAEKYNFDIVTDLPLEGRYEWVRLH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01902 173 Gene3D p27 114 173 IPR044898 -
Trre8g01902 173 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 89 172 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre8g01902 173 MobiDBLite consensus disorder prediction 11 57 - -
Trre8g01902 173 MobiDBLite consensus disorder prediction 1 57 - -
Trre8g01902 173 Pfam Cyclin-dependent kinase inhibitor 131 172 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01902 Trre-Chr8 15155178 15156146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01902 133 172 Core Cell Cycle Gene Families AT1G49620 70.000 4.39e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01902 - - tpra:123924291 257.299