Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01899 ATGGATTCAAACTCCACCATCAACAATGAAATAGCCATTGATATAACCCCAATCTTGAAAGTATACAAAAACGGTCATGTTGAAAATTTAATGAGTCAAGATCAGGTTGTTCCACCATCCCTTGATCCAACAACAAACGTTGAATCAAAAGATGTTATAATCTCCAAAGAACATAACATATCAGCAAGACTTTTCATTCCCAAAAACAATTATCCACCAACCCAAAAACTCCCTCTCCTTGTTTACTTCCATGGTGGTGGTTTCTGCATCGAAACTCCTTTCTCACCAAACTACCATAACTACCTCAACTCTGTTACTTCACATGCTAACGTTATTGGTGTCTCTGTTGACTACAGAAGAGCACCAGAACACCCTGTTCCCACTGCTCATGAAGATTCATGGCTTGCACTCAAATGGGTTGCTTCACATGTTAATGGAAATGGCTCTGATGAATGGTTGAATCAATATGCAGATTTTGAGAAGGTGTTCTTAGGAGGTGACAGTGCTGGTGCTAATATTTCACACTATTTGGGTCTTCGGGTCGGGAAGGAAAAATTAGATGGTGTGAATCTTGAAGGGATTGTTTATATTCATCCTTATTTTTGGGGTGTGGATGCAATTGGATCAGAACCGGATCGAGCTGAACTTGTAGAAAAGATTCATAATTTATGGCGTTTTACATGTCCAGCCACAAGTGGATCCGATGACCCGTTAATTAACCCGGCTAAGGATCCGAATTTGGGGAGTTTGGGTTGTAAGAGAGTGCTTATTTGTGTTGCTGAGAAAGATATTTGGAGGGATAGGGGTTTGTATTATAAGGAATTGCTTGAAAAAAATGGTTGGGGTGGTGTTGTTGAAGTTGTTGAAACAAAGGATGAGGATCATGTTTTTCATATCTTCAAACCAAGCTGTGAGAATGCTTTGGCCTTTCTTAGCCAAATTGTTTCATTTATCAAAAAGGATTGA 966 0.3934 MDSNSTINNEIAIDITPILKVYKNGHVENLMSQDQVVPPSLDPTTNVESKDVIISKEHNISARLFIPKNNYPPTQKLPLLVYFHGGGFCIETPFSPNYHNYLNSVTSHANVIGVSVDYRRAPEHPVPTAHEDSWLALKWVASHVNGNGSDEWLNQYADFEKVFLGGDSAGANISHYLGLRVGKEKLDGVNLEGIVYIHPYFWGVDAIGSEPDRAELVEKIHNLWRFTCPATSGSDDPLINPAKDPNLGSLGCKRVLICVAEKDIWRDRGLYYKELLEKNGWGGVVEVVETKDEDHVFHIFKPSCENALAFLSQIVSFIKKD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01899 321 Pfam alpha/beta hydrolase fold 80 298 IPR013094 GO:0016787
Trre8g01899 321 PANTHER ARYLACETAMIDE DEACETYLASE 16 305 - -
Trre8g01899 321 Gene3D alpha/beta hydrolase 6 320 IPR029058 -
Trre8g01899 321 SUPERFAMILY alpha/beta-Hydrolases 19 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01899 Trre-Chr8 15129091 15130056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01899 7 319 Carbohydrate Esterase AT3G48690 49.379 2.24e-104 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01899 - - cam:101495689 551.206