Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01898 ATGATTCTCAATTCTCATTCTTTCTCCTTCCCCTCAACAACACTTCCTCTTCAAAAATCATATCCCCTTCTTCCTACATTCAAACTGAGAAAATCTATACTCTTACACTGCACACAACAACCGTTATCCAACATGGATTCAACCTCTTCCACCATTGACGATGAAATAGCCGTTGATCTAACTCCAGTCCTTAAACTATACAAAAGTGGTCGTGTTCAGAGACTAGCAGGTACTGAGATTCTTCCACCATCTCTTGATCCAACAACAAACGTTGAATCAAAAGATGTTATAATCTCAAAAGAACATAATATATCAGCAAGACTTTTCATTCCCAAAACAAATTACCCACCAACCCAAAAACTCCCTCTTCTTGTTTACATCCACGGTGGTGCTTTCTGTATCGAAACTCCTTTCTCACCAAACTACCATAACTACCTCAACTCTGTTACTTCACATGCTAACGTTATTGGTGTCTCTGTTAACTACAGAAGAGCACCAGAACACCCTGTTCCCACTGCTCATGAAGATTCTTGGCTTGCACTCAAATGGGTTGCTTCACATGTTAATGGAAATGGCTCTGATGAATGGTTGAATCAATATGCAGATTTTGAGAAAGTGTTCTTAGGAGGTGACAGTGCTGGTGCTAACATTGCACATTATTTGGGTCTTCGGGTCGGGAAGGAAAAATGGGATGGTGTGAATCTTGAAGGGATTTTTTACGTTCATCCATATTTTTGGGGTGCGGATAGAATTGGGTCAGAATCAAATCAGGCTGAATATATAGAAAAGGTTCATAATTTATGGCGTTTTGCATGTCCAACCACGAGTGGATCCGATGATCCGTTAATTAACCCGGCTAAGGATCCGAATTTGGGGAGTTTGGGTTGTAAGAGAGTGCTTATTTGTGTTGCTGAGCAAGATTTGTTGAAAGATAGGGGTTGGTATTATAAAGAATTGCTTGAAAAAAATGGTTGGGGTGGTGTTGTTGAAGTGATTGAAACAGAGGATGAGAATCATGTTTTTCATATGTTTAAACCAACATGTGAAAAAGCTAAGATTTTGCTTAATCAAGTTGTTTCATTCATCAAAGGTACTTGA 1098 0.3916 MILNSHSFSFPSTTLPLQKSYPLLPTFKLRKSILLHCTQQPLSNMDSTSSTIDDEIAVDLTPVLKLYKSGRVQRLAGTEILPPSLDPTTNVESKDVIISKEHNISARLFIPKTNYPPTQKLPLLVYIHGGAFCIETPFSPNYHNYLNSVTSHANVIGVSVNYRRAPEHPVPTAHEDSWLALKWVASHVNGNGSDEWLNQYADFEKVFLGGDSAGANIAHYLGLRVGKEKWDGVNLEGIFYVHPYFWGADRIGSESNQAEYIEKVHNLWRFACPTTSGSDDPLINPAKDPNLGSLGCKRVLICVAEQDLLKDRGWYYKELLEKNGWGGVVEVIETEDENHVFHMFKPTCEKAKILLNQVVSFIKGT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01898 365 Pfam alpha/beta hydrolase fold 124 343 IPR013094 GO:0016787
Trre8g01898 365 Gene3D alpha/beta hydrolase 56 364 IPR029058 -
Trre8g01898 365 SUPERFAMILY alpha/beta-Hydrolases 64 364 IPR029058 -
Trre8g01898 365 PANTHER ARYLACETAMIDE DEACETYLASE 61 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01898 Trre-Chr8 15124633 15125730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01898 52 364 Carbohydrate Esterase AT3G48690 48.758 1.15e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01898 - - cam:101495689 600.512