Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01896 ATGGTTCATAATTTATGGCGTTTTTCATGTCCAACCACGAGTGGATCCGATGACCTGTTAATTAACCCGGCTAAGGATCCGAATTTGGGGAGTTTGGGTTGTAAGAGAGTGCTTGTTTGTGTTGCTGAGAAAGATTTGTTGAAGGATAGGGGTTGGTATTATAAAGAGTTGCTTGAAAAATCTGGTTGGGGTGGTGTTGTTGAAGTTATTGAGACAGAAGATGAGGTCATGTGTTTCATATGTTCAATCCAACATGTGAAAAAGCTAAGGTTTTGCTTAATCAAGTTGTTTCCTTCATCAAAAGTGCTTGAAAATATCCTTTATTTTAATTTCTCATATTGGTTATGA 348 0.3707 MVHNLWRFSCPTTSGSDDLLINPAKDPNLGSLGCKRVLVCVAEKDLLKDRGWYYKELLEKSGWGGVVEVIETEDEVMCFICSIQHVKKLRFCLIKLFPSSKVLENILYFNFSYWL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01896 115 Gene3D alpha/beta hydrolase 1 91 IPR029058 -
Trre8g01896 115 PANTHER ARYLACETAMIDE DEACETYLASE 5 80 - -
Trre8g01896 115 SUPERFAMILY alpha/beta-Hydrolases 3 81 IPR029058 -
Trre8g01896 115 Pfam alpha/beta hydrolase fold 2 80 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01896 Trre-Chr8 15121198 15121545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01896 5 79 Carbohydrate Esterase AT1G19190 47.368 2.61e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01896 - - cam:101495689 146.747