Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01894 ATGGATTCAAGCTCTAGCGAAGTAGCTCAGGATCTCTCACCTCTACTCAAAATCTACAAAGACGGTCGCATAGAAAGACTCTTAGGATGTGAAATCATTCCTCCATCTTTTGATTCAACAACAAACGTCGAATCAAAAGACATCTCCATCTCAAAACACCAAAACATCTCCGCCAGAATCTTCATTCCTAAACCCAACAACAACATCAACAATCCAATCCCAAACCAAAAAAAACTCCCTCTCCTTGTTTACTTCCATGGTGGTGGTTTCTGCATAGAAACATCATCATCACCACAATACCACAATTTCCTTAACTCCATTGTTTCTCAAGCTCAAATAATAGCAGTTTCAGTTGATTACAGAAGAGCCCCAGAACACCCTCTTCCTATTGCATATGAAGATTCATGGACTTCTCTCAAATGGGTCGCTTCTCATTTAAACGGAAACGGTTCTGATGAATGGATCAACCGTTATGCAGATTTTGAGAAAGTGTTTTTAGCTGGAGACAGTGCTGGAGCAAACATTGCACATAACATGGGTATTCGTGTTGGAACCGAAGGGCTTCATGGGATAAATGTCGAAGGGATTGTTTTGGTTCATTCTTTCTTTTGGGGTGTGGAAAGGATTGGATCTGAGATTAAACAAGATGAACATTTAGCTTTGGTGGAGAATTTATGGCGGTTTGTGTATCCGACAAGTTTAGGATCCGATGACCCGTTTTTGAATCCGGGTTTTGATCCGAATTTAGGGAAGTTAAGTTGTAAGAGAGTGTTGGTTTTTGTTGCTGAGAATGATTTGTTGAAGGATAGAGGTTGGTATTATAAAGAGTTGCTTGAGAAAATTGGTTGGGGTGGTGTTGTTGAAGTGATTGAGACAAAAGGTGAAGGACATGTTTTTCATCTCTTTAATCCTAAGTGTGATAATGCTCTCTCTTTGTTTAATCAAATTGCTTCCTTTATTAATCATAGTGATTAA 975 0.3908 MDSSSSEVAQDLSPLLKIYKDGRIERLLGCEIIPPSFDSTTNVESKDISISKHQNISARIFIPKPNNNINNPIPNQKKLPLLVYFHGGGFCIETSSSPQYHNFLNSIVSQAQIIAVSVDYRRAPEHPLPIAYEDSWTSLKWVASHLNGNGSDEWINRYADFEKVFLAGDSAGANIAHNMGIRVGTEGLHGINVEGIVLVHSFFWGVERIGSEIKQDEHLALVENLWRFVYPTSLGSDDPFLNPGFDPNLGKLSCKRVLVFVAENDLLKDRGWYYKELLEKIGWGGVVEVIETKGEGHVFHLFNPKCDNALSLFNQIASFINHSD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01894 324 Pfam alpha/beta hydrolase fold 82 300 IPR013094 GO:0016787
Trre8g01894 324 Gene3D alpha/beta hydrolase 19 323 IPR029058 -
Trre8g01894 324 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 164 176 IPR033140 -
Trre8g01894 324 PANTHER ARYLACETAMIDE DEACETYLASE 12 306 - -
Trre8g01894 324 SUPERFAMILY alpha/beta-Hydrolases 16 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01894 Trre-Chr8 15109614 15110588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01894 6 321 Carbohydrate Esterase AT3G48700 49.080 3.24e-104 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01894 - - gmx:100801816 483.026